Detail



ID : Ahg333040

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333040|fgenesh1_pm.C_scaffold_9000068
Sequence
ATGGTTTGGT TAATGAAAGT TTTTGTCTTT GTGACATTAG TCTCTTTACT GTTTGTAATA ACAGAATCAG CTCCTGAATC TGCTCTTATT ACCAAACTTC CTGGCTTCGA AGGCACTTTT CCTTCAAAAC ATTACTCCGG GTATGTGACT ATTGATAAGG ATCATGGAAA GAATCTGTGG TATTACTTTG TTGAATCGGA GAAGGATCCA TCGAAAGATC CGGTCGTACT ATGGCTCAAT GGTGGTCCAG GTTGTTCAAG CATGGATGGA TTCGTGTATG AGCATGGTCC ATTCAATTTT GAACTACCAA AGAAAAACAA TAGCCTCCCA CACTTGCATC TTAATCCTTA TAGTTGGTCC AAGGTATCTA ACATTATATA TCTTGATTCT CCTGTTGGTG TGGGATTCTC TTACTCAAAC AACATTTCTG ATTACATAAC CGGTGATACT AAAACCGCGG TTGACTCTCA CGCGTTCCTT CTCAAGTGGT TCCAAATGTT TCCTGAGTTT CAATCAAATC CATTTTTCAT CTCTGGAGAA TCTTACGCCG GAGTTTATGT CCCAACTCTT GCTTCAGAAG TTGTCAAAGG GATCAAGAAT GGGGTAAAGC CGGCTCTTAA CTTCAAGGGA TATTTGGTTG GAAATGGAGT TGCGGATCAA GTATTTGATG GAAATGCTCT CGTCCCGTTT GCTCACGGGA TGGGACTAAT ATCTGATGAA CTCTTTGAGA ACGTTACAAA AGCTTGCCAT GGAAATTTCT ATGAAATAGA GGGACTTGAG TGCGAGGAAC AGTATACGAA AGTTTCTGAT GATACTGAAA GGTTGAACAT ATACAACATT CTTGAGCCAT GTTACCACGG AACATCGCTA TCTGCTTTCG ACATTAGATC ACTACCTTCA AGTCTCCTTC AGCTAGGTAA AACCGAACGA CCGTTAGCTA TAAGAAAAAG AATGTTTGGT CGAGCATGGC CAGTTCGTGC GCCTGTTCGT CCAGGCATTG TTCCTAGCTG GTCTCAACTC CTTGCTGACG TCTCTGTTCC TTGTATTGAT GATAGAGTTG CAACAGCGTG GCTGAACGAT CCAGCGATTA GGAAAGCTAT TCATACTAAA GAGGAGAGTG AGATTGGAAG GTGGGAACTC TGCAGTGGGA AACTCTCATT CGATCACGAT GCAGGAAGCA TGATCAAATT CCATAGAAAC CTTACTCTAA GTGGATATAG AGCTCTTATT TACAGCGGGG ATCACGATAT GTGTGTTCCA TATACTGGCT CTGAAGCTTG GACAAAATCT CTTGGATACA AAGTGATTGA TGAATGGAGG GCATGGATAT CAAACGACCA AGTCGCAGGG TATACGCAAG GATATGCAAA CAATCTCACA TTTTTAACCA TCAAGGCAAA TATTGAATCT CAACTCAAAT AA 
Length1422
Protein Sequence
Protein Residue
Map Locationscaffold_9: 1346812.. 1349129
Download Sequence
A.thaliana
AGI-codeAT4G12910.1
Descriptionserine carboxypeptidase-like 20
TAIR curator summary
Alias[scpl20][serine carboxypeptidase-like 20]
Gene coexpression
MR
MR Locus Description
11.4018 Ahg940758 Putative glycosyl hydrolase of unknown function (DUF1680)
25.4165 Ahg489570 long-chain acyl-CoA synthetase 7
29.0345 Ahg486759 alpha/beta-Hydrolases superfamily protein
48.5386 Ahg474732
51.3809 Ahg481426 Sulfite exporter TauE/SafE family protein
62.498 Ahg490746 alanine:glyoxylate aminotransferase 2
71.9514 Ahg481582 calmodulin 5
74.8331 Ahg328437 Protein phosphatase 2C family protein
75.1399 Ahg497092 P-loop containing nucleoside triphosphate hydrolases superfamily protein
76.3675 Ahg483748 ubiquitin-conjugating enzyme 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression