Detail



ID : Ahg333373

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333373|fgenesh1_pm.C_scaffold_662000001
Sequence
ATGAGAAATA CGTTAGAAAA AGAAAGAGAA ATACTAAAGG CTAATCCTAA AGTTTTTTTT TATTTGGCCG TGGACGGCAG ACTGGCTGGT CGGATCGTGA TTGAGCTCTT TGCAGATACG ACCCCGCGAA CGGCAGAGAA CTTCCGGGCC CTATGTACCG GGGAGAAAGG GATGGGGAAG CTTGGTAAGC CACTCCACTA CAAGGGATCA ATCTTCCACC GTCTTGTCCC CTATCAAATG TTCTGTGGAG GAGATATCAC TGCTGGTAAT GGAAGTGGAG GCGAATGCAT CTACGAAGAT AGATTTTTCG AGGATGAGAA CTTCATCAGG CAGCACACCG GTCCAGGTTT CATCTCCATG GAAAACCGTG GTCCAGACAC CAACGAATCT GGGTTCTTGA TCGGCCTGCA GGAGGACAGT TTACTTGGCC GCGAGACCGT CGCTTTCGGT CAAGTTGTTC AAGGATTGAC TCTGCTCAAT GCCTTAAGTA GAGAGCTTGG AAATCGTAAC AACAAGCCTT CCAAGCCCCT GGTGATCGCT GACTGCGGTC AAATCTCATA G 
Length561
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8984699.. 8985606
Download Sequence
A.thaliana
AGI-codeAT3G21481.1
Description
TAIR curator summaryPseudogene of AT4G34870; ROC5 (ROTAMASE CYP 5); peptidyl-prolyl cis-trans isomerase
Alias
Gene coexpression
MR
MR Locus Description
4.3589 Ahg892272 GDSL-like Lipase/Acylhydrolase superfamily protein
45.0333 Ahg485651 peptidoglycan-binding LysM domain-containing protein
50.892 Ahg943165 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
51.2348 Ahg943324 RNI-like superfamily protein
55.4076 Ahg917658 subtilase 4.13
58.0947 Ahg333411
62.1048 Ahg937412 F-box associated ubiquitination effector family protein
64.6916 Ahg479334 F-box family protein
67.9117 Ahg471935 MADS-box transcription factor family protein
69.455 Ahg487143 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression