Detail


ID : Ahg334636

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|334636|fgenesh1_pg.C_scaffold_1001201
Sequence
ATGGCTCCTA AATCGGATAA CACAGAAGCT ATCGTACTCA ACTTTGTAAA TGAGCAAAAC AAACCTCTAA ACACTCAAAA TGCAGCTGAT GCTCTGCAAA AGTTTAACCT TAAGAAGACT GCAGTTCAAA AGGCACTTGA TAGCCTTGCT GATGCCGGAA AAATCACGTT CAAAGAGTAT GGTAAGCAGA AGATTTACAT TGCTAGACAA GACCAGTTTG AGATTCCAAA CAGTGAAGAA CTTGCTCAAA TGAAAGAAGA AAACGCCAAA CTTCAAGAAC AACTCCAAGA GAAGAAGAAA ACAATCAGTG ATGTGGAGTC AGAAATCAAG AGCTTGCAGT CAAACTTGAC ACTAGAAGAG ATACAAGAGA AAGATGCCAA ACTAAGAAAG GAGGTTAGGG AAATGGAAGA GAAACTGATC AAACTACGCG AAGGGATTAC ATTGGTGAGG CCAGAAGATA AAAAAGCTGT TGAAGATATG TACGCGGATA AGATTAATCA GTGGCGCAAG CGTAAGAGGA TGTTCAGAGA CATTTGGGAT ACTGTAACAG AGAATTCTCC CAAAGATGTT AAGGAACTAA AGGAGGAGCT TGGAATTGAA TATGATGAAG ATGTCGATCT AAGTTTCCAG GCATATTCTG ACCTAATTCA ACATGGTAAA AAGAGGCCTA GAGGACAGTA A
Length681
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5332493.. 5333770
Download Sequence
A.thaliana
AGI-codeAT1G13330.1
DescriptionArabidopsis Hop2 homolog
TAIR curator summaryEncodes the Arabidopsis Hop2 homologue. In other species, Hop2 is proposed to be involved in inter-homolog bias in double strand break repair.
Alias[AHP2][Arabidopsis Hop2 homolog]
Gene coexpression
MR
MR Locus Description
28.7924 Ahg470071 Chalcone and stilbene synthase family protein
40.8044 Ahg919199 CLAVATA3/ESR-RELATED 20
42.45 Ahg896491
54.037 Ahg920027 ubiquitin-related protein 3
67.9853 Ahg927080 Small nuclear ribonucleoprotein family protein
77.7303 Ahg899704 PapD-like superfamily protein
77.7303 Ahg899703 PapD-like superfamily protein
90.1499 Ahg945943 Galactose mutarotase-like superfamily protein
91.3017 Ahg926121 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
94.0744 Ahg922543 Putative membrane lipoprotein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression