Detail



ID : Ahg334683

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|334683|fgenesh1_pg.C_scaffold_1001248
Sequence
ATGTTTGGAT TTTTCAAATC TCCGGGGAAC AATAAGCTTC CCAATGAATC GTCAAACAAC AAAGGAGGAA CAATCACTGC AGGAAGAAGG ACTTCTTCAG AACCAATCCT GATAACACCA GATTTCGACG ATGACGACAA ATACAAGAAC GGTTTCAGCG ATTCCGGTGG TTTGCAGAGC CAAACAACAG AAGAATTAGA AAACTACGCG GTTTATAAAG CTGAAGAAAC AACCAAAGGT GTTAATAATT GTCTTAAGAT CGCTGAAGAT ATAAGATCAG ATGCTACAAG AACGCTCGAA ATGTTGCATC AGCAAGGTGA ACAGATCAAC AGGACTCATG TTATGGCTGT TGATATGGAT AAAGATCTCA GTCGGGGGGA GAAGCTTTTG AACAACTTAG GAGGAATGTT TTCAAAGCCA TGGAAACCTA AGAAGACTAA AAATATCACA GGACCTATGA TCACACCAGA TAAACCGTCG AAGAAGAGCG AGAATCACAA AGAAGAACGA GAGAAACTCG GTTTGGGTGC GAAAGGTCGA TCGAGCAGTC AACCATCAGG ATTAGGACAA CCAACAAACG CGTTGCAGAA AGTTGAGCAA GAGAAGGCAA AGCAAGACGA TGGACTTTCA GATTTAAGTG ACATATTGGG TGATCTTAAG AGCATGGCCG TTGATATGGG ATCTGAGATC GACAAGCAAA ACAAAGCCCT TGATCATCTC GGAGACGATG TTGATGAGCT TAACTCTCGT GTTCAAGGAG CTAATCAACG CGCACGTCAC TTGCTTTCTA AATAA 
Length795
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5564374.. 5565843
Download Sequence
A.thaliana
AGI-codeAT1G13890.1
Descriptionsoluble N-ethylmaleimide-sensitive factor adaptor protein 30
TAIR curator summaryEncodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.
Alias[ATSNAP30][SNAP30][soluble N-ethylmaleimide-sensitive factor adaptor protein 30]
Gene coexpression
MR
MR Locus Description
5.91608 Ahg887694 Plant invertase/pectin methylesterase inhibitor superfamily protein
10.0995 Ahg342300 Heavy metal transport/detoxification superfamily protein
13.0767 Ahg350576 Mitochondrial ribosomal protein L37
14.2829 Ahg333050
15.2971 Ahg899462
15.4919 Ahg326692 Protein of unknown function (DUF295)
16.2481 Ahg318121
16.7033 Ahg323423
17.4929 Ahg923376
20.445 Ahg934969
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression