Detail



ID : Ahg335400

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|335400|fgenesh1_pg.C_scaffold_1001965
Sequence
ATGGCACACG CCGATCCCTT TTCAACGTCG ACAATGCTCA ATGCTTCACA CCATCTCCGT TTTGCCGCCG CAAGAGAACC CATCTCAGAA GGGTATCCGG CGGTTGCTCC TCCTCATCCA CGTGGCTTCT CCGTCAAGTT TCCTCCTCCG GGATTCACCC CATCTCCGTC ACCTTTAACT AACTCATTCT TCACCGCCTT AACTCCAAAA ATGGATGTTC TACATGATCT TAAAGTTAGA CCAAAGAGAG CTTCAAACGA TGGCGTCATT GCTGACATCA GATTCCGATT ACTTCTTGAT GATCGCAAGA AACAAGAACG GCTCCAAACG CAACAGAAAC TTCTGGGGAT AACAGATGAC GTGGACACTT TATTCGCCGC CACTATCTTG CGCCGCTTCC TCCACATCAT CACCGACAAG TACGCATCGT ACGTGGCGAG ACGGGGGATA GCAGTTTTCA ATAAGAAGAA GAAAGAAGCA ATTTACGAGC GCATTCTCCA TTACGCGCTA TACATAGCGC GTGACAAACA CGGTTGCCTC GCGCTCAACG ACATCATAAC CGACGCGGAC GATCTTTACT ACAAAAACAA GCTCTTTGAC GTAATCGCGC ACAAAGCTAT TTTACTAAGC AACGATGCTT ATGGGAACTT TGTGATACAA CAGGTGCTTA AACTGAATGA CTTGCGTTGC AAGAACAACA TCGTCGCTAG TCTACGTGGC CACTTTGTTG ATCTCTCGAT TCAGAGATAT GGAAGCTACA TTGTGAACCT GCTTTTGGAG ACGGAGGAGT CAATGGTTGT GGTGGTGGAG GAGCTTTTGG AAGGAGGTAG GTTGATGAGG TTGACGAGGA ATGTGTATGG GAATTTCGTG GTGTGCAAGG CACTGAGAGT CACGCAGAAG GAGATGGTTA GGACTGATCT GTATTGGGGT TTGGTGCATA AGCTCAAGCC TTTTCACAAT CCCTTGCGTA GGTCTCGTGG AAGCAATTCT TGGACTCAAT TCAATCCTAA ATCCTTCAAG AATGCTGATT GA 
Length1032
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8912906.. 8914448
Download Sequence
A.thaliana
AGI-codeAT1G21620.1
Descriptionpumilio 20
TAIR curator summaryEncodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Alias[APUM20][PUM20][pumilio 20]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg941046 Nucleic acid-binding, OB-fold-like protein
5 Ahg925212 Plant thionin family protein
5.74456 Ahg938032 PIF1 helicase
6.08276 Ahg916799 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
6.7082 Ahg910743
8.60233 Virus1991
13.4164 Ahg319272
14.4914 Ahg894787
15.8745 Ahg946057 RNI-like superfamily protein
18.5472 Ahg926307
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression