Detail



ID : Ahg335467

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|335467|fgenesh1_pg.C_scaffold_1002032
Sequence
ATGATGAGAG GTGAATTTGG AGAAGCTTCG TCTCCTTCGT CTCTTTCACG TTCTCCTTCT TCTCCTCTTC AAACACAATC ACATCATCAC TCTCCTAAGT TCTATCGTAA TCATTATGTC TTCCCTGGTG ACTCATCTTA CAACAGTTCG ACTAGGTTCT GTCTCCGATC TCCGTCTGAT TACTCACTTT CGAGTTACTT CTCAAATGGG TTGTGTTCTT CTGAGGATGG TTCGTCTCAG TTCGCTTCTC CTCCACTCGA TGGCTTGATG ACCAAGTATA ATCTTGGTGG TGATGATTTA GGTCTTTGCG AAAGTTTCCA TCTTTTGAAT GTTGCAGAAG AAGAATACAA GACTCATCAC CAAACTCAAA GGAGCAACTT TGGTAACTAT GACGCTAATG GTGATGGTGG ATTGCGATTT TACTCTGGTT TTGGTGTTGA TCAAAAGGAT CAAACTTTAC TCTTCCCAAA TCAAAGGGAT CATCAGATTC CTAATCTGGG ATTGCAGAGT TGTTACATGA ACAATTACTC TGTTCCGGTT TATCGAAAAA GCGGTGTTGG GACATTGTTT GATGATCAAG GAAGTAGCAG TAACACGAAT CAGAGTCTGC CTAAAGTATC TGAATTCCAG GGATATGTTT ACTTAATGGC TAAAGATCAA CATGGTTGCA GATTTTTACA GAGGATCTTC GAAGATGGAA GTGCTTTAGA TGCTATGGTT ATTTTCAATG AAGTGATTCC TCATGTTGTT GAGCTTATGA TGGATCCTTT TGGGAATTAC TTGATGCAGA AACTATTAGA TGTTTGTAAT GAAGAACAAC GAACACAGAT CATACTTATG GTCACTTCAG AACCTGGACA GCTTATTCGG ATTTCGCTCA ACGCTTACGG TACTCGAGTT GTTCAGAGAT TAGTGGAATC AATCAAGACA AGGAAGCAGA TTTCTTTGGT GAAATTAGCT CTTAGACCTG GATTTCTCAA TCTCATTAGG GATCTAAATG GGAATCATGT GATTCAACGT TGCTTGAAGT GCCTTAGCAC AAAAGATAAC GAGTTCATCT TTGAAGATGC TACAAAGTTC TGTATCGATA TTGCGACACA TCGACATGGA TGTTGTGTGT TACAAAAATG CATTGCTTAT TCCAGTGGAC TACAAAGAGA GAAGCTTGTA ACTGAAATCT CAAGAAACAG TCTCTTCCTT GCTCAAGATC CTTATGGGAA CTATGCGGTC CAATTCGTTC TAGAACTGAG GGATTTTTCT GCGATAGCCG CGATGCTTGC GCAGTTAAAA GGTCATTATG TAGAGCTTTC AATGCAGAAA TTCAGTAGTC ATATGGTGGA AAGATGCTTA ACACATTGTC CAGAGAGCCG TCCTCAGATC GTGCGTGAAC TCATCTCTGT TCCTCATTTT GATATTCTAA TTCAAGACCC TTATGCTAAC TTTGTCATCC AAGCTGCTCT TGCTGTCACC AAGGGTTCAC TTCATGCCAC ACTCGTTGAA GTCATAAGGC CTCACTCGAT TCTACGTAAC AATCCTTATT GCAAAAGGAT TTTCTCAAGA AATCTCTTGA AGAATTGA 
Length1578
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9304093.. 9306015
Download Sequence
A.thaliana
AGI-codeAT1G22240.1
Descriptionpumilio 8
TAIR curator summaryEncodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Alias[APUM8][PUM8][pumilio 8]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg931792 F-box and associated interaction domains-containing protein
10.583 Ahg906202
13.1149 Ahg926360 F-box and associated interaction domains-containing protein
14.6969 Ahg933284 Ubiquitin carboxyl-terminal hydrolase-related protein
16.2481 Virus1678
18.3303 Ahg344395
21.1187 Ahg482034 CLAVATA3/ESR-RELATED 7
26.2679 Virus0515
36.6606 Ahg477892 RmlC-like cupins superfamily protein
36.9324 Ahg949269
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression