Detail



ID : Ahg335523

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|335523|fgenesh1_pg.C_scaffold_1002088
Sequence
ATGGCTTCTC CTTTCTTCTT TGTGTTCCTC CTTCTCTCTG CACTTTCACT GGAGAATACC TATGCCAGTC CCGATTACAG AGAAGCACTC TCAAAGTCAT TACTCTTTTT CCAAGGTCAG CGGTCTGGTC GCCTCCCCCG TGACCAAAAA CTCTCATGGA GGTCGAGCTC TGGCCTCTCT GATGGCTCCT CTGCTCATGT GGACTTGACC GGAGGCTACT ATGATGCTGG GGACAATGTG AAGTTCAATT TCCCGATGGC GTTCACCACT ACGATGCTCT CCTGGAGCTC TTTGGAGTAC GGTAAGAAGA TGGGATCCGA ACTCCAGAAC TCTCGTGTGG CCATCCGTTG GGCCACAGAC TATCTACTGA AATGTGCCAG GGCCACACCC GGGAAGCTTT ATGTTGGTGT AGGAGACCCT AATGGTGATC ACAAGTGTTG GGAACGCCCA GAAGATATGG ACACTCCTCG CACAGTCTAC TCTGTCTCTC CCTCAAACCC TGGCTCTGAT GTAGCCGCTG AAACCGCTGC TGCTCTAGCT GCAAGCTCCA TGGTTTTCAG GAAAGTTGAT CCCAAGTACT CTCGCTTGCT CCTGGTGACA GCGAAGAAGG TCATGCAGTT CGCAATTCAA TACCAAGGCG CTTATAGTGA CTCCCTTTCC TCTTCCGTCT GTCCTTTTTA CTGCTCCTAC TCTGGCTACA AGGACGAGCT GGTATGGGGA GCGGCATGGC TGCATAGAGC AACCAACGAC CCGTATTACA CAAACTTCAT AAAATCCTTA GGAGGTGGAG ATCAGCCTGA CATCTTCAGT TGGGACAATA AATACGCCGG TGCCTATGTT CTTCTCTCAC GAAGAGCAGT ACTGAACAAA GACAACAACT TTGAGCCCTA CAAGCAAGCA GCTGAGAATT TCATGTGCAA GATCCTTCCA AATTCTCCCT CCTCGTCAAC AAAGTACACT AAAGGTGGAT TGATGTACAA ATTACCTCAG AGCAATCTAC AATACGTGAC ATCGATAACA TTCTTGCTCA CGACCTACGC CAAATACATG AAATCCACGA AACACACCTT CAACTGCGGA AACTCACTCA TCGTCCCCAA TGCACTGATA AATCTATCGA AGCGACAAGT CGATTACATA CTCGGTGTGA ACCCAATGAA GATGTCGTAC ATGGTTGGAT TCAGCTCCAA TTTCCCCAAG AGAATCCATC ACAGAGGATC CTCACTCCCG AGCAGAGCCG TCCGTTCCAA TTCTCTCGGC TGCAACGGCG GATTCCAATC GTTCAGAACA CAAAACCCTA ACCCTAACAT ATTAACCGGA GCAATCGTCG GAGGACCGAA TCAAAACGAT GAGTATCCAG ATCAGAGAGA CGATTACACC AGATCTGAGC CAGCTACTTA CATCAACGCT GCATTCGTCG GACCATTGGC GTATTTCGCC GCCGGCCGAT CGCCGTAA 
Length1458
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9610851.. 9612621
Download Sequence
A.thaliana
AGI-codeAT1G22880.1
Descriptioncellulase 5
TAIR curator summary
Alias[ATCEL5][ATGH9B4][CEL5][ARABIDOPSIS THALIANA CELLULASE 5][ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B4][cellulase 5]
Gene coexpression
MR
MR Locus Description
17.7482 Ahg904725 cation/H+ exchanger 19
19.6214 Ahg944394 Basic-leucine zipper (bZIP) transcription factor family protein
25.3377 Ahg941727
29.0689 Ahg328395 Pectin lyase-like superfamily protein
29.5635 Ahg485341 ARM repeat superfamily protein
33.4066 Ahg931690 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein
36.1386 Ahg901754 ENTH/VHS/GAT family protein
51.7687 Ahg321816 strictosidine synthase-like 1
52 Ahg471472 RNA-binding (RRM/RBD/RNP motifs) family protein
55.0818 Ahg480296 Arginyl-tRNA synthetase, class Ic
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression