Detail



ID : Ahg335587

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|335587|fgenesh1_pg.C_scaffold_1002152
Sequence
ATGACAACAC TCAACCATCT GCTTGATCTG CCGGGGCAGA TTTGCCATGT CCAATGTGGT TTTTGCACCA CTATTTTACT GGTGAGTGTA CCCTTCACAA GCTTGTCAAT GGTAGTGACT GTGAGATGTG GGCATTGCAC AAGCCTTCTC TCTGTCAATT TGATGAAGGC TTCCTTTATT CCTCTCCATC TCCTTGCTTC TCTGTCCCAT CTTGATGAGA CGGGGAAAGA GGAGGTTGCA GCTACGGATG CTGTGGAAGA AGAAGCATGG AAGGTGAATC AGGAGAAGGA GAACAGTCCA ACGACTTTGG TTTCATCTTC AGACAATGAA GATGAAGATG TCTCTCGTGT TTACCAAGTT GTCAATAAAC CTCCTGAGAA ACGACAAAGA GCTCCTTCAG CTTACAATTG CTTCATCAAG GAAGAGATCA GGAGGTTAAA GGCTCAGAAT CCAAGCATGG CTCACAAGGA AGCTTTCAGC TTAGCTGCCA AAAATTGGGC CCATTTTCCT CCAGTTCACA ACAAGAGAGC TGCTTCAGAT CAATGTTTTT GTGAGGAAGA TAACAATGCA ATTCTACCAT GCAATGCTTT TGAGGACCAT GAAGAAAGCA ATAATGGGTT CCGAGAGAGA AAGGCTCAGA GGCATTCCAT TTGGGGAAAA TCTCCATTTG AGTATAACAA TTTGGGATAT GAAATTTTAA CAAAAAAATA A 
Length711
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9901779.. 9903420
Download Sequence
A.thaliana
AGI-codeAT1G23420.1
DescriptionPlant-specific transcription factor YABBY family protein
TAIR curator summaryEssential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.
Alias[INO][INNER NO OUTER]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg950915
3.74166 Ahg935950
5.47723 Ahg900781 Acyl-CoA N-acyltransferases (NAT) superfamily protein
5.74456 Ahg896947
6.48074 Ahg913205
9.79796 Ahg918948
10.7703 Ahg320709
10.9545 Ahg891056
11.6189 Ahg353787
14.8661 Ahg497089 RALF-like 30
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression