Detail



ID : Ahg336505

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|336505|fgenesh1_pg.C_scaffold_1003070
Sequence
ATGAAGAAGA TACATGTTCC TCCAGAAACA GGCAAGTTCA TGTTCTGTCT CTTCTTCACC TTCTTCTCTT GTTGCCATGT ATGTTTCTCT GAGTTGTCTT TGAACCAGAC AAACACAATG ATCGAACTCT CTAGGTTCCT TAATATCTCG GATTGGAATC TTCCTGGTTC TGAGAGGAAT CCATGTTCAT GGAACGGTGT TCTTTGCAGC CGACCAGACA ATAGCTCTGT GATTAGCCTG TCTCTCTCTA ACTTTGATCT CTCCAATTCT TCCTTCTTAC CACTTGTCTG CAATCTCCAG ACTTTGGAGT CTCTCGATGT CTCCAACAAC AGATTAAGCT CAATCCCAGA TGGGTTCGTG ACGAATTGTG AAAAACTCAT TGGGTTGAAG CATCTGAACT TCAGCACGAA CAAGTTTTCT TCTTCCCCTG GTTTCCGCGG TTTCTCCAAA TTGGCGGTTC TTGATTTCTC TCACAACGTG TTGAGTGGGA ACATTGGAGA CTATGGTTTT GATGGGTTGG TTCAGTTGAG GAGTTTGAAT CTTAGCTTCA ACAGTTTAAC TGGTTCTGTT CCAGTTCATT TGACCAAAGG TCTGGAGAAG CTCGAGGTTT CAGATAATCG TTTGAGCGGT ACTATTCCCG AGGGGATCGA CGATTACCAA GAACTAAAGT TGATAGATCT CAGTGATAAT CAGCTTAATG GGTCAATCCC GAGTTCGTTG GGAAATCTCT CCAAGTTAGA AAGTTTACTT CTTTCCAACA ACTATCTTAG TGGGCTAATC CCAGAATCAC TTTCAAGCAT CCAAACCTTA CGTCGATTTG CAGCGAACCG TAACCAATTC ACGGGAAGAA TTCCATCAGG GATCACAAAA CACCTTGAGA ACTTAGATCT CAGTTTCAAC AAGTTAGCGG AGTCGATTCC AGATGACCTT TTGTCGCAGC TTAAACTCGT CTCTGTGGAT TTGTCGTTTA ATCATCTTGT TGGATGGATA CCGCAAAGCA TTTCCCCTAG CCTGGTTAGG CTGAGACTAG GAAGCAATAA GCTGACAGGG AAGGTGCCCT CTACTGCGTT TGAATCACTG CAGAACCTAA TCTATCTGGA GATGGACAAC AACAGTTTAA CTGGCCACAT ACCTCCTTCA TTTGGAAATC TTGTGATCTT GAATCTCCTG AACTTGGCTA TGAACGAGTT CACCGGAAAC TTACCTCCTG CATTTGGAAA TCTTACAAGG CTTCAAGTGA TAAAACTGCA GCAAAACAAG CTTACTGGAG AAATCCCAGA TACTATCACA TTTTTGAGTA ACCTCTTGAT TCTTAACATC AGCTGGAATT CTCTGAGTGG ATCCATACCG CCTTCGCTTT CAAACCTAAC GAGGCTTTCC AGCATGAACT TGCAAGGCAA CAATCTGAGT GGTACCATAC CTGATAACAT TAGAAATCTG GAGGATTTGA TAGAACTTCA GCTCGGACAA AACCAGCTAC GAGGGAGGAT CCCAGTAATG CCACGAAAGT TGCAAATTTC CTTAAATCTC AGCTACAACT TGTTTGAAGG ATCTATCCCT ACTACATTGT CTGAACTTGA CCGCTTGGAA GTTCTTGATC TGTCAAATAA CAAATTCTCC GGCGAAATCC CTGATTTTCT GAGAAGTTTA ATGTCCCTTA CACAGCTCAT ACTCTCCAAC AATCAGCTTA CCGGAAATAT TCCAAAGTTC ACCAAGAATG TTTTACTCAA TGTCAGCGGA AACCCTGGGA TCAAGCTGAA TAATGAGGAT AACTTCTCAA TCCCGAAAAC GTCATCTGGG AAGAGTAAAC TAGTTTTCGT TATAATCTTT GTCGCCAGTG GAGTTTGCGC TATCATGGCC GGGATCATAA CTGTCATCGT GCTGAAACTT TCTAGGCGCT TCAAGGGGAT TAACAACATA GAGGCCGACC AAAACGAAGA AGGCTCAACT GTTCTTCCCG AGGTCATTCA TGGGAAACTT CTCACCTCAA ATGCTCTACA CAGATCAAAC ATTAACTTCA CCAAAGCTGT GGAAGCTGTT GCTCATCCAG AAAGTGCTCT GTATCAGACA ATGTTCTGGA GTTACTACAG AGTAGTAATG CCCTCTGGTT CGAGTTACTT CATCAAAAAA CTTAACACAA GAGACAGGAT TTTCCAACAA GCCAGTAGTG AGCAACTAGA GCTAGAGCTA GAGATGTTGG GCAAGCTGCA TCACGCGAAC ATAATGGTTC CACTAGCTTA TGTGCTCTAT TCAGAAGGAT GCTTGCTCGT CTATGACTTT GCTCACACGT GTACCCTTTA CGATGTTCTA CACAACCATA CCAGTGATGT GGTTGATTGG ACAAGCAGGT ATAGTATTGC GGTTGGTATA GCTCAGGGAA TCTCTTACTT GCATGGATCT ATATCCAACG GTCGTGATCC AATCCTTCTA CCAGATCTCT CTAGTAAAAA AATAATACTC AAGTCGCTCA CTGAGCCCCT GGTAGGGGAC ATTGAACTGT TCAAGGTAAT CGATCCTTCC AGAAGCAACA GCAGCCTCTC CGCTGTTGCA GGCACCATCG GCTACATTCC ACCAGAGTAT GCTTACACAA TGAGGGTGAC AATGGCTGGG AATGTCTACA GCTTTGGGGT GATTCTTTTG GAGTTGTTAA CTGGAAGGCC AGCTGTAAGT GAAGGAAGAG ATTTGGCTAA GTGGGTGCAG AGCCATTCCA GCCATCAAGA GCAGCAGAAC AACATTCTTG ATCTCAGAGT GAGCAAAACA TCAACTGTAG CAACAAAGCA GATGCTCCGT GCCCTCAGTA TTGCTCTTGC CTGCATAAAC ATCTCTCCTG GGGCAAGACC AAAGATGAAG ACTGTTCTAC GGATGCTCAC AAGACTTTAA 
Length2880
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15464221.. 15467183
Download Sequence
A.thaliana
AGI-codeAT1G34420.1
Descriptionleucine-rich repeat transmembrane protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8 Ahg492857 VACUOLAR SORTING RECEPTOR 7
11.0454 Ahg942355 carbon/nitrogen insensitive 1
14.6969 Ahg470722 exocyst subunit exo70 family protein B2
16.7033 Ahg331636 Copper transport protein family
21.0713 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
22.0454 Ahg495340 Heavy metal transport/detoxification superfamily protein
22.5832 Ahg913087 PLATZ transcription factor family protein
22.6495 Ahg350245 RING/U-box superfamily protein
23.0868 Ahg931117 somatic embryogenesis receptor-like kinase 4
23.6854 Ahg939077 Phosphoglycerate mutase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression