Detail


ID : Ahg336830

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|336830|fgenesh1_pg.C_scaffold_1003395
Sequence
ATGTCAGTTC TTATTAGGAC AAGCCTAGGG GATATAGTGA CTGATCTCTA CACAGATAAA GCCCCTAAAA CCTGCAATAA TTTTCTCAAG CTATGCCGTA TGAAGTATTA CAATGGGTGC CTTATCCACA CAGTAAAGGA TTCCATAGCA GAAACAGGTG ATCCAACAGG AACAGGGTCT GGTGGAGACT CAATATACAA ATTTCTTGAA GGTGACCATG CTCGGTTCTT CAGCGAAGAG ATTTGCCCTG AATTGAAACA TTCAAAGACT GGCACTGTTG CTATGGTTAG TTCTGGTGAA AATCTGAATG CTTCCCAGTT CTATATCACA CTTTGCGATG ATCTTGACCA TCTTGATGGG AAACACACTG TGTTTGGGGA GGTTGTCGAG GGGTTTGACG TTTTGACTAG TCTAGCCAAA GTTTCTGTTG ATGCGAAGAA CAGACCCTGT AAAAACATAA GAATAGAGCA CACATATATA CTTGAAGATC CATTTGATGA TCTCCCACAA CTGGCTGAAT TGATACCAGA TACTTCCCCT GAGGGAAAAC CGAAGGAAGA GGTCACAGAT GACGGGCGAC TCGAATATGA TTGGGTTCCA ACAGATGAAG AACTTGGTCC TCAGGAACTG GAGGAGGTCA TCAACAAAAA CGCTGCCCAT TCAAGTGCTG TTTTACTTGA AACTAAAGAA GATATCCCTG AGGCTGTGGA GGATTCTAGC ACTTTGCTTT ACATATGGGG TTTGAATCCT TGTACTGATG CAGATGGCCT CAACACCATT TTTTCCCGCT TTGGAACAGT CATCTCGGTT CGAGTCCTCC GGGATCGCAA GACTGGTGAG AGCTTAGGTT GTGCATTAAT CCAGTTTGAA AATGAGGTTG CAAGCAAAGA AGCCCGTCTT GTGATGGATA ATTGTACTAT CGATGATAGA CGAATCTCCG TAGAAATTGA GGACTGCTTT GTGGAAAGTA TCAAGGAGTC TGACACGAAT ACTGGGTTAT CTCTTCCCAG TCAATGGGAT CTCATAGCTG ATAAACAGAT GATTGTTGAC GAGCAGCCTC TGCATGTTGC GACATGCACA CAGATAATCA GTCCAAATAC TGAAGACGCA AAGTATGTCG TTGATATGGA AAAGATAGGC AAGTTTGTTG TTGGACTTGG CGATAAATCT TCTCCCACTG AGATAGAAGT AGGAATGCGT GTGGGAGTTG ATAGGAAGAA ATATCAGATA CAGATTCCTC TACCTCCAAA GACTGATCCT CGTGCTATCA TGATGACGGT TGAAGAGAAA CCGGACATAA CTTACTGTGA TATCGGTGGC TGTGCAAGGA GCAGATTGAG AAGATTAGAG AGGTATGTTG TTGAACTACC AATGCTTCAT CCAGAGAAAT TTGTGAAGCT TGGAATAGAT CCTCCCAAGG GCGTTCTTTG CTATGGTCCT CCGGGTACTG GAAAAACCCT TGTGGCTAGA GCTGTAGCTA ATAGAACCGG TGCTTGCTTT ATCAGGATTA TTGGCAGTGA GCTCGTTCAG AAGTACATCG GTGAAGGAGC AAGGATGGTT CGTGAACTGT TTCAGATGGC ACGCTCAAAG AAAGCTTGCA TTTTGTTCAT TGACGAAATC GATGCCATTG GTGGTGCAAG ATTTGATGAC GGTGTAGGCG GTGATAATGA AGTCCAACGT ACTATGCTTG AGATTGTGAA TCAGCTTGAT GGGTTTGACG CACGTGGTAA CATCAAGGTT CTTATGGCAA CAAACAGGCC TGACATACTG GACCCTGCTC TTTTACGTCC TGGACGTCTT GACCGCAAGA TTGAGTTTTG TCTGCCTGAT CTGGAGAGCA GAACACAGAT CTTCAAGATT CACACACGAA CCATGAACTG CGAAAGAGAC ATCCGGTTTG AACTCCTTGC TGGTCTCTGC CCAAATTCAA CAGGAGCTGA TATCAGAAGT GTGTGCATAG AAGCCGGAAT GTATGCAATA GGAGCTAGGA GAAAGGCTGT GAGTGAGAAA GACTTTCTGG ACGCAGTGAA CAAAGTGGTT AAAGGCTATC AAAAGTTCAG TGCAACTCCC AAGTATATGG CCTACTACAT TTAG
Length2094
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22309121.. 22312655
Download Sequence
A.thaliana
AGI-codeAT1G53780.2
Descriptionpeptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg949588
3.4641 Ahg920201 allene oxide cyclase 4
4 Ahg912127
8.48528 Ahg338401 Cullin family protein
10.247 Virus1179
11.1803 Ahg947840 Disease resistance protein (TIR-NBS class)
12.1655 Ahg489725 Major facilitator superfamily protein
13.9642 Ahg906322
16.9411 Ahg916487
16.9411 Ahg916231
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression