Detail



ID : Ahg337379

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|337379|fgenesh1_pg.C_scaffold_1003944
Sequence
ATGGAGCAAG AACAAGAGAG TTACAAATCA AGATTGTTTC ATTTCAAGAA CATGAACGAG AACTCAGCTT CAAGACATAT TAAAAGTTGG AGCTCAGATT GTGCAATGAG AATGGATGGT TCAGACAATT TGGATGATGA TAATGACATG ATGATGTTTA GGAGTCAACC GGGCAAATTT GGCAGCGTTG ACCGACCTTC TTTGCCTCTA GGCGGAGTAA CACCTAACCG CAACGACAAG CTTCCGAGAG TCGCTTCATC GGAATCCATG GAGGCACTAT TAGTATTACA AGCAGCAATG GAGCAAATGA AAGAGAAATT TTCGAAATTG CTTCTTGGAG AAGATATGTC AGGAGGAGGA AAAGGTGTTT CATCGGCTTT GGCTTTATCT AACGCCATTA CCAACCTCGC AGCTTCTGCA TTTGGAGAAC AACGGCGTTT AGAGCCAATG GCGGCGGATA GAAAAACGCG TTGGAGGAGA GAAATTGGAT GGCTTATCTC TGTGGCTGAT CATATAGTTG AATTCGCTCC AACACAACAA ACAAACAAAG ATGGTACTTC AATGGAAGTC ATGTCAACAA GACAAAGAAC AGATCTTCTC TGTAACATCC CTGCACTTAA GAAACTCGAT GCTATGCTTC TCGATTGTCT TGATAAATTC AAGGATCAGG ATGAGTTTTA TTATGTCAAA AAAGATTCTC CTGATTCTTC CGAGACAAGG AACGATGAGA AATGGTGGTT ACCGGCAGTA AAAGTCCCAC CTAACGGGCT CTCAGAGATA TCGAGAAGGT TTCTCCAGAG CCAGAAGGAA TGTGTGAATC AAGTCCTTAA AGCTGCAATG GCGATAAACG CTCAAGTTCT GTCTGAAATG GAGATTCCTG AAAGCTACCT TGAGTCACTT CCTAAGAATG GGAGAGCTAG CTTGGGAGAT GTGATATACA GAATGATAAC AGTAGAGATG TTTGATGCAG ATCAATTCCT TATTGAAATG GATTTATCAT CTGAGCACAA GATTCTTGAT TTAAAGAACA GAATCGAAGC ATCGATTGTG ATATGGAAGA GGAAAATGGT GCAGAAGGAC ACAAAGTCTC CTTGGGGATC AACAGTGAGT ATTGAGAAAA GAGAACAGTT TGAAGAGAGA GCTGAAACAA TCTTGCTACT ATTGAAACAA GGGTTTCCCG GAATCTCACA GTCCTCGCTC GATATCAGCA AGATTCAATT CAACAGAGAT GTAGGACTTG CAATCTTGGA GAGTTACTCA AGAGTGCTTG AGAGTTTGGC TCACACCGTG ATGTCGAGAA TAGAAGACGT CCTTTACGCT GACCAGCTTA CTCAAGAACC TACAAATAAT GCACCTTCTA AGAACAGATA TAGCTTGAAG GAGAATGAGA AACTAAGGGA GGAAAGACTA AGTTTCACAG AGGATATGGC TTCAGGAACA CTTTCTGATG TAATGCAATG GGGTAACAAA AACAACGAAT TGAAGAAAGA AAGCTTTTTC GGAGATAGAG AGAAACCGTT GTTGTCGAAA GTCACCGGTA TAATGACTAA CAACAAGAAG AGTTCTTATC TTGAAAATCT TGGAGCTATG AGGAGTCCAA CCGCGAGATA CTCCTGA 
Length1617
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26466958.. 26469041
Download Sequence
A.thaliana
AGI-codeAT1G52240.1
DescriptionRHO guanyl-nucleotide exchange factor 11
TAIR curator summaryEncodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .
Alias[ATROPGEF11][PIRF1][ROPGEF11][phytochrome interacting RopGEF 1][ROP (rho of plants) guanine nucleotide exchange factor 11]
Gene coexpression
MR
MR Locus Description
43.5431 Ahg490879 cytochrome P450, family 81, subfamily F, polypeptide 4
44.8999 Ahg947721
62.5939 Ahg900866
86.7871 Ahg921385
91.214 Ahg918958
95.6556 Ahg487420 sucrose-proton symporter 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression