Detail



ID : Ahg337558

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|337558|fgenesh1_pg.C_scaffold_1004123
Sequence
ATGGAAAACT CTCGATCAAC GTCAATCATC TTCTTTGCTT ACACAACAAT CGTATTGATC GATTCCATCA ACTGCAGAGA CAACAACAAC AACAATCTGG TAACAAACCA ATCCGCTTTG TTCGTGTTTG GAGATTCTGT GTTCGATGCT GGAAACAACA ACTACATCGA TACTCTTCCC AGTTTCCGGT CTAATTACTG GCCATACGGC CAAACCACTT TCAAATTCCC TACTGGAAGA GTCTCCGACG GACGTACAAT TCCTGATTTT ATTGCGGAGT ACGCATGGTT ACCGTTGATC CCACCATATC TACAACCAAG TAACGGTCAA AATCAGTTTA CCTATGGAGT TAGTTTTGCT TCCGCCGGTG CCGGAGCTTT AGCCGGCACC TTTCCCGGAA TGGTGATAGA TTTGAAAACA CAATTAGACA ACTTTAAAAA GGTTGAAGAA TTGTTGAGAT TTAAGTTAGG AGAAGCACAA GGGAAGAGGG TTATTGCAAC AGCAGTTTAT CTGTTTCATA TCGGAGTCAA CGATTATCAA TATCCATTCT CTACAAACTC TTCCGTTTTC CAATCCAATC CTCGAGAGAT ATACGTTGAT TTTGTTGTCA GTAACACGAC AGCCGTGATC AAGGAAGTGT ATAGAATTGG AGGAAGGAAG TTTGGATTCT TGAACATGGG AGCGTATGAT TGTGCACCAG CCTCATTGAT TATAGACCAA ACAAAAATAG GATCTTGTTT TAAGCCGGTC ACCGAGCTGA TCAGTCTGCA CAACGATAAG CTTCGGGATG GTTTGAGGCG GCTAGAGCGT GAACTATCGG GATTCAAATA CGCTCTTCAT GACTATCACA CTTCCTTATC CGAACGAATG AACAATCCTT CGAAATACGG GTTTAAGGAG GGGAAGAAGG CATGTTGTGG AACCGGACCA TTGAGGGGAA TCAATACATG TGGAGGCCGA ATGGGAGTAT CTCAAAGTTA CGAGTTATGC GAAAACGTTA CAGATTACTT GTTCTTTGAT CCTTTTCATT TGACTGAGAA AGCACATCAA CAAATTGCAG AGCTGATTTG GAGCGGATCG ACCAACGTCA CCGAACCTTA TAATCTCAAA GCGCTGTTTG AACTTCATTA A 
Length1131
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27453933.. 27455411
Download Sequence
A.thaliana
AGI-codeAT1G53940.1
DescriptionGDSL-motif lipase 2
TAIR curator summaryEncodes a lipase, has in vitro lipase activity with p-nitrophenyl acetate and p-nitrophenyl butyrate, gene expression induced by hormones, negatively regulates auxin signaling, involved in disease resistance
Alias[GLIP2][GDSL-motif lipase 2]
Gene coexpression
MR
MR Locus Description
10.3441 Ahg347421 Leucine-rich repeat protein kinase family protein
22.7156 Ahg489354 Protein phosphatase 2C family protein
27.9285 Ahg920128
45.3872 Ahg338279 desulfo-glucosinolate sulfotransferase 18
52 Ahg911866 Protein of unknown function (DUF833)
52.2207 Ahg351609 Protein of Unknown Function (DUF239)
53.479 Ahg316947 Pectin lyase-like superfamily protein
54.7905 Ahg905868 Ubiquitin-specific protease family C19-related protein
59.5399 Ahg901222 homeobox-3
61.1555 Ahg358487 Protein with RING/U-box and TRAF-like domains
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression