Detail


ID : Ahg338279

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|338279|fgenesh1_pg.C_scaffold_2000378
Sequence
ATGAGTTTCT CAAATCCTCT TTCTCTATCT CCAATGGAAT CACACACTAC TGTACCAAGT AACCACGAGA CCAAGACAGA ATCAACAGAG TTCGAGAAGA ATCAGAAACG GTACAAAGAC CTAATCGCTA CCTTTCCTCA CACGAAAGGC TGGAGACCGA AAGGTCCGTT GATAGAGTAC CATGGTTGCT GGTTCGTACA GCCGCTCTTA GAAGGTTGCC TTCACGCGCA AGAGTTCTTC CAAGCAAGAC CCATTGACTT CCTCATTTGT AGCTCCGCAA AGACAGGTAC CACTTGGCTC AAGGCTCTAA CTTTCGCCAT CGTCAATCGA ACTTGCTTCG ACGATTCCTC AAACCCTCTC CTAAAACGTA ACCCTCATGA GCTTGTTCCT TTCATTGAGA ACGAATTTGC TTTCTTCCCT CAAGTTGATG TTATCAAAGA CAAAGGAAAC ACTCTGTTCT CTACTCATAT CCCGTACGGG TTATTACCGA AATCTATTGC GAACTCCGGT TGTAAGATGG TTTACATTTG GAGAGACCCG AAGGACACTT TCATCTCCAT GTGGACTTTC TTCCAAAAGC AAAGGTCAGA CTTTGGCCCT CTCAATAGTC TTGAAGAGTC TTTTGATATG TTTTGTCGAG GTACTTCTGT GTACGGTCCT TATCTAGATC ATGTCTTGGG GTATTGGAAA GCTTACCAAG AGAATCCAAA TCAGATATTG TTCCTCAAGT ACGAGACAAT GAGAGCTGAT CCTTTACCGC ATGTGAAGAG ATTGGCTCAG TTTATGGGTT ACGGATTCAC AGCTGAGGAA GAGAAGAAAG ATGTTGTTGA GAAAGTTGTG AATCTTTGCA GTTTCGAGAC GTTAAAGAAT CTTGAAGTGA ACGAAGGAGA GAAAATCAGA GAGGACATTG CTTCGGTTCA TTGGCCGAAT AGCGCGTATT TCAGGAAGGG AATGGTTGGA GATTGGCACA ACTACCTGAC TCCGGAGATG GCAGCTCGTA TCGATGGGCT AATGGAAGAG AAATTTAAGG GCTCTGGTTT GCTTGAACAT GATATAGATG ACTGA
Length1065
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2651754.. 2652729
Download Sequence
A.thaliana
AGI-codeAT1G74090.1
Descriptiondesulfo-glucosinolate sulfotransferase 18
TAIR curator summaryencodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.
Alias[ATSOT18][ATST5B][SOT18][DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18][ARABIDOPSIS SULFOTRANSFERASE 5B][desulfo-glucosinolate sulfotransferase 18]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg929733 ROTUNDIFOLIA like 20
6 Ahg942211
10.0995 Ahg932542 RNI-like superfamily protein
10.247 Ahg331706 oligopeptide transporter 9
14.6287 Ahg893650 Adenine nucleotide alpha hydrolases-like superfamily protein
16 Ahg927569 Plant protein of unknown function (DUF946)
18.1934 Ahg923962
19.1833 Ahg913138 Glycosyl hydrolase superfamily protein
21.7025 Ahg925627
22.4499 Ahg329713 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression