Detail



ID : Ahg337680

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|337680|fgenesh1_pg.C_scaffold_1004245
Sequence
ATGTATTTTA TGGTGTCAAA GATTGCAGTT AGTGGTCGTA ACAAGCATTT GATAAATGGG AAGCTTGCAC AACCTAGTCA AGTCCAGAAT CTTTTCCACT CTGTGCAGCT TAATAATGTC AACAATCCAC ACTTTCTCAT CATGCAAGGT AGAATCACCA AAGTCTTAAA CATGAAACCT CCCGAGATAC TGTGGGTGCT GGAACAAGAA TGTATGAAAA CAAGAAAGAA AGAATGTTCA ACAGTAGAGG AAGAAGAAGA AGAAGATGAG ACATGGAGGA GCGAGATAGT AACAAGGGTG ATGAGAATCG TTCGTGTTTC CTTTGGAAGT AGTCTTTATC AGAAGACAGC AGAGGGCAAA GTTGATGCAG CTCTTGATCC AAGTCACACA CACAACATAG GAAGAAGCTC ATTTCCCTCA CTCGCAGATA ATGGTAATAT GCTTGAACTT GGATTGGATT TACTAAGTGC TTCCTCGATA TCCTCATGA 
Length489
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28143067.. 28143943
Download Sequence
A.thaliana
AGI-codeAT5G62410.1
Descriptionstructural maintenance of chromosomes 2
TAIR curator summarySMC2-1 (SMC2)
Alias[ATCAP-E1][ATSMC4][SMC2][TTN3][structural maintenance of chromosomes 2][TITAN 3]
Gene coexpression
MR
MR Locus Description
32.8938 Ahg328078 photosystem II subunit O-2
41.328 Ahg492999 Pollen Ole e 1 allergen and extensin family protein
50.5569 Ahg476125
67.587 Ahg330483 nodulin MtN21 /EamA-like transporter family protein
88.3855 Ahg917601 phosphatidylinositol-speciwc phospholipase C5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression