Detail



ID : Ahg338322

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|338322|fgenesh1_pg.C_scaffold_2000421
Sequence
ATGAGAGGTA CCAAGAAGCA TGTTGTCACT AGAGCCTCTC CTTCTCTTGC TATTGTTGAG GTGAAGCCTC ATGACCACAA AGATGCTGTT CCTATTGAAG CACCGATTGT ATCTTCTTAC AATGATCAGA TCAGGCCACT GCTTGACACT GTGGACAGGC TAAGGAACCT GAATGTGATG AGAGAAGGGA TCCAGCTTCC CACCATTGTT GTGGTTGGAG ACCAGTCGTC GGGGAAGTCA AGTGTTCTTG AGTCCTTGGC AGGAATCAGT TTGCCTCGTG GGCAAGGAAT CTGCACTAGG GTTCCTCTTG TCATGAGGCT CCAGCGAAGC TCTAGCCCTG AACCTGAAAT CTGGCTGGAG TATAATGACA AAGTTGTTCA GACGGATGAG GAACACATAG CTAATGCTAT ATGTGATGCG ACTGATGTGA TTGCTGGATC TGGCAAAGGG GTTTCAGACA CACCCCTTAC GCTCCATGTG AAGAAGGCTG GTGTTCCAGA TATTACCATG GTTGATCTCC CTGGGATAAC CCGGGTTCCT GTGAACGGAC AGCCTGAAAA CATCTATGAA CAGATTTCCG GGATGGTTAT GAAGTACATC GAGCCACAGG AATCCATCAT CCTCAATGTT CTGTCAGCCA CAGTTGATTT TACAACTTGT GAGTCCATAC GTATGTCTAA GCAAGTTGAT AAAACAGGCG AACGAACTCT GGCTGTTGTC ACCAAGGCAG ACATGGCTCC TGAAGGGCTC CTGCAGAAAG TAACTGCAGA TGATGTGAGT ATTGGACTTG GTTATGTCTG TGTCAGAAAC CGAATCGGAG AAGAGACGTA TGAAGAAGCT CGAATGCAAG AAGAGTTACT TTTTAGGAAT CATCCAATGC TAAGCTTGAT CGATGATGAC ATTGTGGGCA TCCCTGTATT AGCTCACAAG TTGACGCAGA TCCAGGGAAT GATGATATCC CGATGTTTGC CTGAAATCGA AAGGAAAATC AACGAGAAAA TGGAGATCAG TGTCCTCGAG TTTAATAAGC TTCCAATAGT GATGGCTTCA ACTGGGGAAG CATTGATGGC TCTAATGGAT GTCATTGGTT CCGCCAAAGA GTCTCTCTTA AGAATTCTCG TCCAAGGAGA TTTCTCTGAA TACCCCGATG ATCAAAACAT GCATTGTACT GCCCGCTTGG CTGAAATGTT GAACGGGTTC TCAGATAATC TGCAAGCACA ATCTCAGGTC GCTTCAGAGT TCTTGATGGA CGAAATTAAA ATTTTAGAAG AGTGCAAATG TATCGGATTG CCTAATTTTA TCCCCAGATC TTCTTTCTTA GCTATCCTTT CACAACATGT GGATGGAATT CATGCCAAGC CGGTTGAGTT CATCAAAGAG ATATGGGACT ACATTGAAGT TGTTCTCTCG TCTGTCATTA CCAAGTATTC TGACAACTTT CCACAGATCC AATCCTCCAT CAAAAGGGCT GGTTGTAATC TAATGAGCAA GACTAAGGAA CGTTCAGTGA ACAGAGAGAA ACCTGACTAC TTCTCTTTAA CTGGATTTGG GAATGTGAAG ATCTCGCATC TACGACATTA TCACGCTCAT TTGCTGCAAC AAGCGTTTGA TATGAAGATG AGGATCACAT CGTACTGGAC AATCGTCCTG CGAAGGATTG TGGATAATCT TGCTCTGTTT CTTCAGTTTT CTGTGAAGAA TCTGGTCAAT AGTCAGTTTC AGAAGGAGAT AGTTGCGGAA ATGGTGGATA CAAGAGCTGG CGGAGGAATT GAGAGGATGC TGGAGGAGTC TCCGTTGGTT GCGAGCAAGA GGGAGAAGCT GAAGAACAGT ATCAAGCTTC TGAAGGAGTC CAAGGACGTT GTGGCGGCGA TCGTTGATCA GAATTCTGGG TACGGAGATC GTTGA 
Length1905
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2853835.. 2856207
Download Sequence
A.thaliana
AGI-codeAT1G60540.1
Description
TAIR curator summarypseudogene of the dynamin family
Alias[DRP4B][Dynamin related protein 4B]
Gene coexpression
MR
MR Locus Description
18.1108 Ahg944205 HVA22-like protein K
30.6431 Ahg344726
33.2566 Ahg320107 Major facilitator superfamily protein
58.8643 Ahg490623 probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2
60.0999 Ahg930820
65.307 Ahg934838 Integrase-type DNA-binding superfamily protein
74.5989 Ahg932721
81.0925 Ahg489303 YELLOW STRIPE like 2
87.1493 Ahg480729 Rer1 family protein
92.8655 Ahg925985 DNA-binding HORMA family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression