Detail



ID : Ahg338342

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|338342|fgenesh1_pg.C_scaffold_2000441
Sequence
ATGGAGGTAT CAGCTTATGA TCGAATCAAA GCCGAACTGT TAAACGCAGA AGACGAAGTA ATAATCTCAC GTTATCTGAA GCGTATGATC GTTAACGGAG ATTCTTGGCC TAATCACTTC ATTGAATACG CAGACGTGTT CAACAAGGAT CCAAATGAGA TATTCAGTTC TGAGAGACCT AGATTCGTGA TCGTTAAACC TCGAACAGGG AATTGTGGTA AAACCGATGG ATGTGATGAA TCTGGTTGCT GGAGGATCAT GGCTCGTGAT AAACTGATAA AGTCGGAGGA GACTGGGAAG ATTCTAGGGT TCAAGAAGAT CCTCAAGTTC TGCCTAAAGT GGAAACCTAG AGAATACAAG AGGAGTTGGG TAATGGAAGA GTATAGGCTT CCTAATAACT TGAACTGGAA GCAAGATCAT GTGATTTGCA AGATTCGGTT TCTGTTTGAA GCTGAAATTA GTTTCTTGCT AGCCAAGCAT TTCTACACTA CATCAGAATC ACTTCCTCGT AATGAGCTGT TGCCAGCTTA TGGATTCTAT CCACATTCTG AACAAGAGGA TGATGAATCT TATTTGTTGA CGATAATGAC TTCTGAAGGA AACGATTGGC CTAGCTACGT TACCAACAAC GTGTATTGTC TGCATCCTTT CGAGCTTGTG GATCTTCGAG ATCGGATGTT TTGTGATTAC GGAACATGCA TCTACGCTAA CAAGACTGGT GGTGAAACGG ATATATATAA TGGTGGTTAC TGGAAGATCC TGCACCGTGA TAGGCCGATC AAGTCAAAGT CCGGGAAGAC CATTGGTTTC AAGAAGGTTT TTCAGTTTTA TGAACCGGAG AGAGAAAGAA TTTTTTGTAA TGGACAAGAA GTGAAGATAG CTTGGATTAT AGAAGAGTAT AGGCTTAGCG AAAAGGTGAA GCAGAATAAA GTGTTATTTA GTTTCATTAT GGAGAACGAC GCAGCTTATG ATCTAATCAA ACACGAACTG TTAAACGCAG AAGACGAAGT AATAATCTCA CGTTATCTGA AGGGTATGAT CGTCAACGGA GATTCATGGC CTGATCACTT CATCGTAGAC GCAAACGTAT TCAACAAGAA TCCAAATGAG GTGTTCAATT CTGAGAGACC TAGATTCGTG ATCGTTAAAC CACGAACAGA GGCTTGTGGT AAAACCGATG GATGTGAATC TGGTTGCTGG AGGATCATGG GTCGTGATAA ACTGATAAAG TCGGAGGAGA CTGGGAAGAT TCTAGGGTTC AAGAAGATTC TCAAGTTCTG CAAGAAGACG AAACCAAGAG AATACAAGAG AAGTTGGGTA ATGGAAGAGT ATAGGCTTAC CAAGAACTTG AACTGGAAGC AAGATCATGT CATTTGCAAG ATTCGGTTAA TGTTTGAAGC TGAGATTAGT TTCTTGCTAA AGAAGCATTT CTACACTACA TCAGAATCGG TTCTTGGAAA TGGGTTGTTG CCATCTTATG GATATTCATC AACTACGCAA GAGGAGGATG AATCTTATAT GGAGACGATA GTGACTTGTG AAGGAAACTA TTGGCCTAGC TACGTTACCA ACGACGTGTA CTGTCTGCAT CCAATGGACC TTGTGGATCC TCAAGATCCG ATGTTTCATG ATTACGGAAC CTGCATCTTC GCTAACGGGA CTTGTGGTGA AACTGATAAA TGCGATGGTG GTTACTGGAA GATCCTGCAC CATGATAAGC TGATCACCGG GAAGGTTAAT GGTTTCAAGA AGGTTTTTAA GTTTTATGAA ACACGAAGAT ATGTTTGGGA AGGTGAATAC GTGAACGTAA CTTGGACTAT AGAAGAGTAT AGGCTTAGCG AAAAGGAGAA GGAGGATAAA GTGATATGCG TTATCAAGTT TACCCTTGAT AACTAG 
Length1896
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2962584.. 2965973
Download Sequence
A.thaliana
AGI-codeAT1G60300.1
DescriptionNAC (No Apical Meristem) domain transcriptional regulator superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg496329 Oleosin family protein
13.4907 Ahg920239 basic leucine-zipper 58
13.8564 Ahg888871 Pectin lyase-like superfamily protein
34.641 Ahg336658
42.4264 Ahg925116 F-box family protein
53.3854 Ahg950073 C2H2 and C2HC zinc fingers superfamily protein
56.1249 Ahg917385 Cystatin/monellin superfamily protein
58.5577 Ahg485651 peptidoglycan-binding LysM domain-containing protein
59.0339 Ahg322360
62.0967 Ahg946772 glycine-rich protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression