Detail



ID : Ahg950073

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950073|scaffold_801960.1
Sequence
TTAAATTTTA CAAACAAATT GTAATGGAGA ACCAATCTAT GTCTTCTTCA AGCTCCTGCC CACACAAACA TGATCAAAAA CTCAAAAGTT CCGTTGTGGC CGTGGAGGTC CTGGAGGAGG AGACAGTGAA CAATCCGGAC ATGTATTATA ATAAGATCTA CATCTGTTAC TTGTGCAAGG GAGTGTTCCA GACCCCTCAT GCCCTTGGCG GTCACGGAAC CACCGAGAAG GACCAAGAAT TGGAGAGGCA GCAGAAGATC CAGATCGAGT CAAGGCTTTC TAACAAAGAC AAGTCTAACT TGATCTTTGG TGGGTCTTCA CAAGATGTTT TATCAAATGA TAATCATCTT GGACTCTCTC TTGGTCAGTC CATAGGAGGT AGCAGCAGCA GCAGCAACGT TTACCCGTTG GTTAATGTTG GAGTCACAGA CATGAACATG AACAACTATA GCTCACATGA TTTACCAAAT GATATTAATC TTGACCTTAC TCTCGGTCCT TCTAACTCCA TAGGAGGCAG CAACGATAAC AACATAACTA ACTCATATGT CAATGAGGAA GTCACTAGAA AAACCACGAA TATGATCATT CCCGTGCGTC CCCGTGTGTC TAGATACCAT TTTGTTGCTG GAAACCCGCT TGATTCAATC ACTAGAAATA TTCCTGATCC TTCTATTGCT CCTCCTCATC GAAACACCTA TCTTTTTCAT GATTCGTTTT CTTTACAAGA GAATGGCTCG GGCTCAAGTC ACTCATAAAG TCTCCTCTCA AAGGGAAA 
Length778
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15446148.. 15446911
Download Sequence
A.thaliana
AGI-codeAT5G54340.1
DescriptionC2H2 and C2HC zinc fingers superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg486769 Glycosyl hydrolase family protein
3.31662 Ahg892041 cation/H+ exchanger 26
5.47723 Ahg477926 galacturonosyltransferase-like 4
18 Ahg926860 RmlC-like cupins superfamily protein
19.6977 Ahg929147 F-box and associated interaction domains-containing protein
21.6333 Ahg322756 Cellulase (glycosyl hydrolase family 5) protein
26.2679 Ahg926787
26.4953 Ahg347421 Leucine-rich repeat protein kinase family protein
29.2404 Ahg948081
30.9354 Ahg889767 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression