| Annotation |
|---|
| Description | jgi|Araly1|339096|fgenesh1_pg.C_scaffold_2001195 |
| Sequence |
ATGGCAAGTG GTTTGCGTCA GATCAGATGT TTTAATCTTT TGAGGAGCAA AGGAATACCA CAAAGGGTAA AGGATTCAAG CACGGGGGAA CATCTTAAAG TATTAGCAGT GGAATCTTCC TATGCTCACT ATGTATTAGA AATCTCTGCC CAGACAAAAG CTGGCAAAGA CTCAATTGAA GCACTGGTGC AGCCCCTGGA AAATGCTGGC AGGATCTTTC AGGAAATCGT ATCCTACCAA AAGCAAATTG AAGATCTTGA ATATAAGCTC GATTTCAGGG GTCTTTGGGC TAAAACTATG GAAGAAATCC AATCAGAACT AAGTACCCTC CATAGCAGCA ACCTACCGAG ATGGGTCTCG AAGAGATTGA AAACAGTAGG ATCTACTGTA AAACAAGAAA CTATATCTCA GTTAAAGAGC TCTGTATGGA AAGAAAAACT TGAAGTTCCT GGTGGGAAGG AGAAAAATGG GCAGGTTCAT CAACAAGTCA TTGAAATCAT CACTGACATA TCTTCGACTG CGGAAAAGTT TCTAAGAAGT GTGTCGTACT TTGCATTACA GCTTTACAAA ATCATGAAAG AGAACAAGAA TCCCAAGGTT TTTAGTGAAG GCTTGTTGTG GATGGCTTCG GTAATTGATG ACTTTGATAT TAGGAAGGAT GTTGTGATGC AATCTAATAT AGCTGCCACC AGAAATTCTA GAATCAAACT TTTGGGTGCT TTAAACAAGT TTAATGGTTC AGGTGACTAT GAATTCCATA ATGAAAGGTT CCGTAATGAT GTCAAACATG CACTACTAAG TGAACTTGAA GCTAAATGTG TTGTAATAGC TATGGGACCA GCTATCGAGA AGGCGAGCAA GGAATGTCCC AGGGACAACT TGAGGCAGAT GAGAGAATGC ACCTTGACTG CTTGTGATTC ATTTCTTGGT GTTGGAAAAA TCAGCAAATG TGTGAGAAAG AGCGGAATGA TGCATGACAG AGATCTTGAG AGTCAGTGGA CAAAAAACTG TATGGCCAGA GTGTTAAAAG GTGTTTCAAA GATTTCAAAA TCAACTTCTA ATGGTAAACT GAAGCAAGGA AATAGAGCTA TAACACTTAA AGATGCAAGA GATCAAATTC AAAGTATGGA ATCGTATTCT CGAAGAGTTG GGAGAGGCAA GAATTTCTTT ATGCTTCATT TTAAGGTCTT TGAAGAGTCA GGTAAAATCT ATGTCTCTCT TCTCAGGGTA AAAAAGTTAA CACAAACACC GAACACAAAA ACAACAACAA CAACTCACGA AAACTCACAA CACAATCACA GAAGAATCGA CAAAAATTCC ACAAACTAG |
| Length | 1329 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 12392126.. 12396614 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G31970.1 |
| Description | DNA repair-recombination protein (RAD50) |
| TAIR curator summary | Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1. |
| Alias | [ATRAD50][RAD50] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 27.55 |
Ahg938033 | |
| 69.8212 |
Ahg337140 | Na+/H+ antiporter 2 |
| 70.1997 |
Ahg908384 | nodulin MtN21 /EamA-like transporter family protein |
| 85.0294 |
Ahg336955 | RNI-like superfamily protein |
| 87.3499 |
Ahg889986 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
| 87.7724 |
Ahg313911 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 88 |
Ahg937111 | |
| 98.0918 |
Ahg492214 | |
| 99.8299 |
Ahg890708 | SCR-like 11 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|