Detail



ID : Ahg340394

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|340394|fgenesh1_pg.C_scaffold_3000157
Sequence
ATGGCGATTG TCCGAACATC AAAGCTTGAT CTCCCAAACC CATCTCTCTC TCCTTCTTCT CCTCAAGTTT CATCGATACT CTACGAACCA ATCTCCTCTT CACTTGCCCT AACTCTATCT GATTCATCCA TCTCTCTTTA CCCTTCTCTC TCCCCTCTCT CTACTCCTTC TCTTTCATAC CCACAAACCC TAATCCCTTC TCCTTGCTCC TCTGCTTCGT TTCTCCTCCT CCGCTCCCAG AATCCTAACT CCAACGACGA TTCCGGTAAC GAAGCCTCCC CACGTGTCTT CTTTATCGTT GCTGGTCCTT ATCGTGGTGG GTCTCGTCTT CTTCTCAGGT TCTATGGTTT ACGGGAAGGG AAAAACAAAT GCTTTGTGAG AGCCAAAGTG ATTTGTGATC AAAAGGGTAT CGAATTCGAT CAGAAAGTTG GGGTTTTGTT GAATTTAAGC CACGGTGTTT CGGTTAAAAT CGTTGGCTCG ACCAATTACT TCTCAATGTA TTCGGTTTCT AGCTCGAAAA TACTCATCTT TGGTCTCAAG GTTGTGACTG ATGGCAGCAA TTGTGGAGAT GATGATGCAG TGGTTGTGAA GCTGCTCATA ACCGGACAAC CTCCAGTGGA TCTAACTGGA GAAATGGAAT ATAGCTTGGT AGACTGGGCA AGGCCTTTGT GTTTGAAAGC AGCTCAAGAT GGTGATTACA ACCAATTGGC AGATCCGCGT CTAGAGCTAA ACTACAATCA TCCAGAGATG GTTCAAATGG CTTCTTGTGC AGCTGCAGCA ATCAGACACT CAACAAGAAG ACGGCCTAAG ATGAGCCAGA TTGTACGAGC ACTAGAAGGA GATATGTCAA TGGATGATCT AAGTGAAGGA ACAAGACCAG GACAAAGCAA GTATTTGAGG CCCGGAAGCG TGAGCTCAGA GTATAACGCA AGCTCGTACA CCGCAGACAT GAAAAAATTC AAGAAATTGG CGTTAGAGAA TAAAGAATAT CAAAGCAGTG AATATGGTGG AACAAGTGAG TATGGTTTAA ATCCTCTGCT TCAAGTAGTG AAGAAATGA 
Length1059
Protein Sequence
Protein Residue
Map Locationscaffold_3: 591224.. 592539
Download Sequence
A.thaliana
AGI-codeAT4G34440.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[AtPERK5][PERK5][proline-rich extensin-like receptor kinase 5]
Gene coexpression
MR
MR Locus Description
5.19615 Virus0862
11.0454 Virus3042
12 Virus1281
18.5742 Virus0061
28.2489 Virus3808
33.9853 Virus1976
38.3406 Ahg887906 AIG2-like (avirulence induced gene) family protein
40.0749 Virus0941
43.9545 Virus1587
44.9889 Virus3909
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression