Detail



ID : Ahg340538

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|340538|fgenesh1_pg.C_scaffold_3000301
Sequence
ATGGCTGATC AGCAGCGAGG CCACCACACC TCAGATTCTC GCCGGAAATC ACTAGCCGGA AAACGAACCT CACAACAAAC TCCGACGCCG TCACTTAGTT CCGGCGGAGT AGCCATGGCG GCTGCGACGA CGGGGACAGG GACGGCGTCT CCGTGTGGGG CTTGCAAGTT CTTGAGAAGG AAGTGTGTGA GTGGATGCAT TTTCGCTCCA CATTTCGGGT CAGACCAAGG AGCGGCTAGG TTCGCGGCCG TTCATAAGGT TTTTGGAGCC AGCAACGTGT CGAAACTGTT GCACCATATT CCGGTGAACC GTCGTCATGA TGCGGTGGTT ACGATCTCAT ATGAGGCTCA AGCTAGGCTC TCTGATCCTG TCTATGGCTG CGTCTCAACC ATCCTTGCTC TCCAACAACA GGTGGCCTCG CTACAGGCGG AGTTATCGGT GGTGCAATCA CAACTGATAA ACAGTAGAGT CGCAATGGCC AACGTTATGC AACAACAAAC TCATCACCAA CAACAGCAAC AACAAACTCA TCACCAACAA CAGCAACAAC AATTAGTCGT TATGCCACAA CCCGAATACT CCAACAACTC CTCCGCCTCC ACCACTCTCG CCGGAGCCGC CATGAACAGC TTCACCGTGG CGGCGGAGGT AGCAGCGGTC AGCTATGACG TCATGGCTCC GACTAACTTA GAACATTCAT TGCAGCCAAT GCCACCGCAT CAGCAAAGGA GAGGAGATCA GCATGAGGAT GAGGAAGAGA GCGGTGCTGA TTTTTCGGTG GCTGTTGGAT CGGCGGCGGT AGCTTCAGAG GCAATATTTC CGGCTGATGG TTATCACCGG AGATGA 
Length846
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1149577.. 1150629
Download Sequence
A.thaliana
AGI-codeAT3G03760.1
DescriptionLOB domain-containing protein 20
TAIR curator summary
Alias[LBD20][LOB domain-containing protein 20]
Gene coexpression
MR
MR Locus Description
9.74679 Ahg924156 DNA-binding storekeeper protein-related transcriptional regulator
10.4881 Ahg949145
22.3159 Ahg485404 hydroxyproline-rich glycoprotein family protein
22.7596 Ahg495065 ethylene response factor 110
23.8328 Ahg891276
28.8097 Ahg906234
37.7889 Ahg471935 MADS-box transcription factor family protein
39.1408 Ahg951228 Peroxidase superfamily protein
42.19 Ahg479980
47.8017 Ahg897380
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression