Detail



ID : Ahg340580

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|340580|fgenesh1_pg.C_scaffold_3000343
Sequence
ATGGCGATAT TGAATCTTCC AAGGGATTTG ATAGAGGAGA TTGTCTCTAG AGTTCCTTTG AAGTATATGA GAGCAGTGCG ATTAACTTGC AAAACGTTGA ACGCTTTATC CCAAAGTTCG AGCTTTATGA AGTTGCACAT AGGTAAAGAA GCAGCAGCAA TAAAGGAAGG GGAGACTCGA ATGATCATGT TGATGGATTG CAATCTTTAT CTAATCAGTG TCTTCTTCAA AGGAGTTGAT ATTGATCCAT ATACAGAGCA TAAAGATTAT TTTTGTGGTA TACCCGAACG ACAAATTTTA TGTTATGAAA TCTACGATTT TGACTCTGTT TTGTGGACGA CTCTTGATGT CACTCCACAT TGGCGGATAG TACCGTTTGG TAACCGTAGC GTTTTCCTTG AGGGAAACAC TTACTATTGT GCTTCAGAAA GGAACTCAGA AGTGGACGGA CACCATGGAC ACAAAGATCA CATAATCTGT TTTGATTATA CAAAAGAGAG ATTTGGACCG CTTCTACCTC TGCCGTTTAG CGCCGGGTAT GATGACTATG TGACTTTATC TTGTGTTAGA GAAGAGAAGC TTGCGGCTTT ACTTACGCAT AACGAAGTAA ATCTATATGA GTTTGACATA TGGATCACGA CTAAGATTGA TGCCGAAAAG ATATCGTGGA ACAAGTTCTT GACAGTGGAT TCGCAACCAG ACATTCCGAA TATATGTGGG GTTTCTTCAT TGATGAGGAG AAGAAAGTCA TCATGGGTCT ACGAGAACCT GACTGCAGAA ATTGTTGGCC ACATGTGTGC ATTTATGATC CAAGTTCAGT GCAAATCAAA TCTCCTGCAG GAGACCAGGT CCGTTCCGTC CATAAGATAG 
Length870
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1350027.. 1352435
Download Sequence
A.thaliana
AGI-codeAT3G23685.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg930973 other RNA
8.12404 Ahg918157 RING/U-box superfamily protein
13.5647 Ahg934199
16.7332 Ahg891036 histone H2A 4
17.3205 Ahg474117 glutathione S-transferase (class phi) 14
19.8997 Ahg924708
20.6398 Ahg948891
24.4949 Ahg333307
26.9815 Virus3899
32.4962 Ahg942059 Domain of unknown function (DUF2431)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression