Detail



ID : Ahg340760

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|340760|fgenesh1_pg.C_scaffold_3000523
Sequence
ATGTCTTGTT CTGAAAAAAC GACGGTGGAT CCACTTCTAA GAGATTTAGA TGAGAAGAAA GAGAGTTTCC GGCGAAACGT GGTGTCTTTG GCGGCGGAGC TGAAACAAGT GAGGGGCCGT TTGGTTATTC AAGAACAATC CTTTCTTAAA GAAACCATAA TTAGAAAAGA AGCAGAGAAA AGGGGAAAGA ATATGGAAAT GGAGATGTGT AAATTGCAGA AGAGATTGGA AGAAAGGAAT TGTCAGCTTG AAGCTTCTGC ATCTGCTGCT GATAAGTTTA TTCTTACTGA ATTTATAATC TTGTTTTTGA GAACACAGTT TATCAAAGAG TTGGAGGAAT TTAGATCAAA GCTTGATGCA ACCAAGCAAA TAGCAGAGGC AAGTGCTGAT TCTGCTCAAT CTACACAGAT CCAATGCTCA ATGCTAAAGA AACAACTTGA CGACAAAACA CGTTCTCTCA GAGAACACGA AGACCGTGTG ACTCAGCTCG GTCATCAGCT TGATGATCTA CAGAGAGGTC TGAGCCTGAG AGAGTGCTCA GAAAAGCAGC TCAGAGAAGA AGTTAAGAGA ATCGAGCGGG AGATAACAGA GTCCATTACG AAAGCTGGGA TAGATGGCAT GGACTGCGAG CTGCAGAAAC TTCTAGAAGA TGTCTCTCCA ATGAAATTTG AGAAGATGAA TAGGCTAGTT GAAGTAAAAG ACGAAGAGAT TACAAAACTG AAAGATGAGA TAAGGTTAAT GTCAGGTCAC TGGAAACACA AGACTAAGGA ACTCGAATCT CAGCTGGAAA AACAGAGAAG AACTGATCAA GATCTGAAGA AGAAGGTACT GAAACTAGAG TTCTGTCTAC AAGAAGCTAG AAGCCAGACT AGAAAGCTGC AGAGGAAAGG GGAAAGAAGG GATATGGAGA TCAAAGAGAT AAGAGATCTG ATATCGGAGA AACAACAGCT TAACAATGAG TCTTGGGATA AACAGAAGTT CTGGGACAAT TCAGGGTTCA AGATCGTTGT GTCAATGTCT ATGTTGATGT TAGTGGTAGT CTCCAAGAGA TGA 
Length1053
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2167124.. 2168916
Download Sequence
A.thaliana
AGI-codeAT3G05830.2
Description
TAIR curator summaryEncodes alpha-helical IF (intermediate filament)-like protein.
Alias
Gene coexpression
MR
MR Locus Description
35.6511 Ahg910885 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding
39.724 Ahg943574 Chitinase family protein
40.5956 Ahg490404 WRKY family transcription factor
40.8901 Ahg477185
59.7913 Ahg494047 Plant calmodulin-binding protein-related
62.458 Ahg474545 TATA binding protein associated factor 21kDa subunit
69.6276 Ahg492690 methionine sulfoxide reductase B7
69.6276 Ahg346169 chitinase, putative
87.0632 Ahg928898 syntaxin of plants 121
91.7932 Ahg488150 Auxin-responsive GH3 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression