Detail



ID : Ahg341414

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|341414|fgenesh1_pg.C_scaffold_3001177
Sequence
ATGGATGGGA GGTTGAATAA TATGTGGAGG TTGACTGTGA ATGAGAGTAA ATTCGTGGAA TCTGCGTTGC AATCTGAGCT CAGAGTCGAT GGTCGTGGCC TTTATGATTA CCGCAAGCTT ACTATTAAGT TTGGCAAGGA ATATGGTAGC TCAGAAGTTC AACTAGGTCA GACTCATGTA ATGGCTTTTG TGACTGCTCA GCTAGTACAA CCTTACAAAG ACAGACCTAA TGAAGGCTCC TTCTCTATCT TCACGGAGTT TTCTCCAATG GCTGATCCAT CGTTTGAGCC TGTTCATCCT GGTGAATCTG CTGTTGAGCT GGGCCGTATT ATAGACCGTG CTCTAAGAGA AAGCCGTGCA GTAGATACAG AGTCGCTCTG TGTTTTTGCT GGAAAGCTGG TCTGGAACTT GGTTGATGCT GCAAATATTG CTGCTTTAGC GGCACTCTTG ACATTCAGGA GACCTGATTG CACTGTAGGA GGGGAGAACA GTCAAGAAGT GATCATACAT CCACCCGAAG AAAGGGAACC ACTTCCGTTG ATAATACATC ATCTCCCAAT AGCCTTCACG TTTGGATTTT TTAATAAAGG CAGTATCTTG GTGATGGACC CAACAGTTGT TGAAGAAGCT GTTATGTCTG GGAGAATGAC TGTGACAGTC AATGCCAATG GCGATATATG CGCAATCCAG AAACCAGGAG AAGAAGGCGT GAACCAGAGT GTAATCCTTC ATTGCCTGCG TCTTGCTTCC TCAAGAGCTG CTGCAACAAC AAAGATAATT AGAGAAGCAG TTGAAGCATA CAACCGTGAG AGGAGCTCAC AGAAGGTGAT GCGACATCAT ACTTTGGCTA AGTCTGAAGT TTTGGGACCT GTTGAAGTTG TGTAG 
Length885
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4939506.. 4941151
Download Sequence
A.thaliana
AGI-codeAT3G12990.1
Descriptionribonuclease PH45A
TAIR curator summaryEncodes a 3'-5' exoribonuclease, partially redundant with CER7. Involved in epicuticular wax biosynthesis.
Alias[RRP45a][ribonuclease PH45A]
Gene coexpression
MR
MR Locus Description
21.2132 Ahg318635 with no lysine (K) kinase 6
54.6626 Ahg943674 transducin family protein / WD-40 repeat family protein
62.482 Ahg919783 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
67.1044 Ahg952360
67.8159 Ahg476390 ARM repeat superfamily protein
77.8653 Ahg916825
81.2034 Ahg479946 MUTL protein homolog 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression