Detail


ID : Ahg341963

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|341963|fgenesh1_pg.C_scaffold_3001726
Sequence
ATGGCGTCTT CAAATTCGCT CATGGACAAC TTGTTCCAGC GAAGCCTCGA GGATCTGATC AAAGGTCTTC GTCTCGGAGA ATCCTTTTTC CTTTCTAAAT CCTTAGAAGA CATCCGCCGC GAAATCAAAT CAACGGATCT CTCCACTAAA TCCATCGCGC TTCAGAAACT CTCCTACCTC GCCGCACTCC ACGGCGTCGA TATGTCTTGG GCAGCGTTTC ACGCCGTCGA GGTCGTGTCC TCATCTCGCT TTTCGGATAA GAGAATCGGT TACCACGCCA TTACTCAGTC ATTCAACGAT CAGACTCCGG TTCTGCTTCT GATCACAAAC CAGCTCCGGA AAGATTTGAA TAGTTCGAAT GAGTATGAGG TGAGTCTAGC TCTGGAATGT TTGTCTAGGA TTGGAACTGA TGATCTAGCT AGGGATTTAA CCTCTGAGGT TTTTACGCTC TTAGGTAGTA GTAAGGCTTT GGTTAAGAAG AAAGCTATTG GTGTGGTTTT GAGGGTTTTC GATAAGTACC ACGATGCTGT TAAGGTATGT TTTAAGCGCC TTGTCGAGAG TCTGGAGAGC TCTGATCCGC AGATTCTGTC AGCTGTGGTT GGAGTGTTCT GTGAACTCAC CACAAAAGAT CCAAGATCTT ATCTTCCTTT AGCTCCTGAA TTTTACAAAA TTTTTGTTGA TTCGAGGAAC AATTGGGATC TGATCAAGGT TCTTAAAATA TTTGCTAAGT TGGCTTTGGT TGAGCCTAGG TTGGCTAAGA AGGTGGCTGA TCCAATCTGT GAACTTATGA GGAGGACTGT GGGAAAGTCT TTGTTGTTTG AGTGTATTAG AACCGTGGTG AGTAGCTTGA GCGATCAGGA AACAGCTTTG AAACTTGCTG TTGCAAAGAT TCGGGAGTTT CTTGTGGACG ATGATCGTAA TCTCAAGTAC CTCGGTCTTC ATGCCTTGTC AATTGTTGCT CCAAAGCATT TGTGGGCAGT TTTGGAGAAC AAAGAAGCTG TCGTCAAGGC TCTAAGCGAT GAGGATCCAA ATGTTAAACT CGAGGCTTTG CATCTTTTAA TGTCAATGGT GAATGAAGAT AATGTGTCTG AGATTTCTCG GATTCTTATG AATTATGCTA TTAAGTCTGA CCCTTTGTTT TGCAACGAGA TTATAGCTTC TATTCTACTG GCATGCTCCC GGAACTCATA TGAGATCATA GTTGACTTTG ATTGGTATTT GTCTCTTCTT GCTGAAATGG CTAGAATCCC ACATTGTCAA AGAGGGCAAG AAATTGGGCA TCAGTTGATT GATATTGGTA CGAGGGTCAA AGATGCTAGA CTGGAGCTAG TTCGTGTTTC TCGAGCGCTG CTTATTGATC CTGCATTGCT TGGTAATCAG TTCTTGCACC CGATATTGTC TGCTGCTGCT TGGGCTTCAG GGGAATATGT CGAGTTCTCT AAGACCCCTT ATGAAATTGC AGAGGCGCTT CTGCAACCAC GTACTTCTCT CTTAGCACCT TCAGTTAGAG CAATCTACAT ACATTCTACT TTCAAAGTTC TTGTCTTCAG TCTCGCGGTG TACTTCTCAG CCCAGGAGCC CACTTCCTCT CCCTTGTTTG AGGAGTCTAC TAGCTCTGGC TCTTCACCGG TGAATGGTAT CACATACAAA TCTATATCAA GTCTGGTGAA TATAATTGAG CTTGGGCTGT GCTCGTTATC TGGGACCCTA GATGTTGAAG TGCAGGAGAG AGCTAAGAAC GTTTTAGGAT TCATCGGTAT GATAAAACAC AAAATAGCCG AGAAAGTAAC CACTCAAGAG AGTGAAACAG AGGCTTCTAG AGCTGTAGCA TTCATGGAAG ATGTTTTCTC AGAAGAGCTT GACCCAGTTA CTTCAACTGC ACAGGAAAAA GTTCCCTTGC CGCATGGGTT AGAGCTGAAA GAGAGTCTTG AAGATCTGCA AGAGATTTGC GGAGAATTTC TGAAACCAGT GGTGGACTCA AATTCAAATT CTAATTCGTT CTCTTCCTCA GAAAATATCA GCTTCTCTGT TGCTAAACTT AGAATCAGTG ATCAAGAAGA AGCCTCATCA TCTTCTTCAT CTCATCTGCC TGAATCTGCA TCCTTACTTG CTGAACACAG AAAGCGTCAT GGCTTGTACT ACCTCTCCTC TCAGAAGAGC GATGACCACT ATGATAGCAA TGGCGACAAC AACAACACGC TAAACGAATA CCCACCAGCA AATGAGATAT CCGCGGACTC ATTTAACAAC AAGAAGAAGA GGAACCAATC GAAACCAAGA CCTGTAGTGG TGAAACTGGA CGAAGGGGAT GAATTAAAGA CCAAGCCAAA TGTTAGTAAT AACGATGAAC CTCTGTCTCT TGCGATCCAG ACCGCTATAA TGGGGAAAGG AAAGGAGAAG GAAAGAGAAA AATATAACCA CGAGAGAGAT CTTGATTCAA GGATTAAAGG ACGTGGCTCG GGAAGAGAGA AGAAAACGAA GAAGAAAAAC GGGGAGAAAA GTACTTTGCA CAGCACAAAG CCGATGGTGG AGAAGACGAC GTTATCGCCG CTGCACATGG GCTTAGCTGC ATGGGCGAGC ATGTCACGGC TTCTGCCGCC GGGGCAAGAA TCATTAGGAG AACCGTCGCT AGAGCAAAAA GGGAAACCCA TGTGGTCTTG A
Length2661
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7365504.. 7368697
Download Sequence
A.thaliana
AGI-codeAT1G48760.1
Descriptiondelta-adaptin
TAIR curator summary
Alias[delta-ADR][PAT4][delta-adaptin][PROTEIN-AFFECTED TRAFFICKING 4]
Gene coexpression
MR
MR Locus Description
19.6723 Ahg931248 UNC-50 family protein
20.9045 Ahg491431 ENTH/VHS/GAT family protein
31.4643 Ahg477298 hydroxyproline-rich glycoprotein family protein
33.3167 Ahg347136 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
47.1593 Ahg494576 Homeodomain-like transcriptional regulator
50.8331 Ahg490050 OSBP(oxysterol binding protein)-related protein 2B
51.0196 Ahg926560 TCP family transcription factor
52.6498 Ahg485972 PBS1-like 1
53.1789 Ahg475260 NAD(P)-linked oxidoreductase superfamily protein
55.0999 Ahg495912 SNARE-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression