Detail



ID : Ahg342141

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|342141|fgenesh1_pg.C_scaffold_3001904
Sequence
ATGAGGAAGT ATTCAAACTC TGAATCTCGT GAGAATCTTC CTAAGCCAGA AGAAAAGTTC TTCTCCACTT TTTCTTTCCC TTGTATGAAT GGTTATCTAC ACACTGGCCA TGCCTTCTCA CTCTCTAAGG TTGATTTTGC TTCTGCTTAC CATAGACTAA GAGATGCCAA TGTGCTTCTT CCTTTTGGTT TCCACTGTAC TGGTATGCCA ATTAAGGCTT CTGCGGATAA GCTTTCTCGT GAGATTCAAC AGTTTGGTAA CCCTCCTGTG TTCACTGCTC AAGATGATAC CATCAAGCAA GCTCCTGAAA CTCAGGAGGA GAGTTGTGAT ATGCTGATAA AATTGACTGA AAAACCGTAC AAAGATTGTT TGTTTAGGGA GGCACTTAAG AATGGGTTTT ACGACTTACA AGCTGCACGA GATGAGTATG GACTCTCTTG TGGCAGTGGC GGTATGAACC ATGATTTGAT ACTGCACTTC ATGGATGTGC AAACACACCT CATTGAACCA ATCCGTCCCC AGTTTGCAGA ATATGTATGG AGGAAACTTT TTAAGAAGGA AGGTTGTGTG GTAACAGCAG GCTGGCCTAC ATCAGATGAG CCAGATTTGG TTCTCAAGAG TGCTAACAAA TATTTGCAAG ATTCTATAGT CTTAATGAGA AAGCTTCTAC AAAAACAGCT CTTAGGTTCC AAGAAGGCTG CTAAGAAAGC TGCTCAAGTT ACAGCAGTGC CAGAGGGGAT CTCGATGGAT GGAGAGCTCA CTGCCTCAAG ATTCTGCCAA AGCAAATTTG TCCAACAAAC CTGTCGTTTT GCCCCTGATG CAGAGATACT TGCAGAACGA AGGGAGATAT TGCAGAAGGA GGGACAATCA GAAAACTTTA AACAAATTCA GAAGCTTTGC ATGCCTTTCC TTAAATTTAA GAAGGACGAG GCAATATCTA TTGGCCCTCA GGCTCTAAAG TTGAGGTTGC CTTTTGGAGA GATCGAAGTC CTTCAGAGTA ACATGGACTT GATCAGGCGG CAAGAGAATC CTCCATCTCC GCGCAATCCA ACTGCCATCT TTGTGACCAG GCACCATTCT ATCATTTCTC GTATAGCCGA TTGGGAAGGC ATTAAGAAGA CAACTGATAC ATACTATAGA CGTTCAAGCA GTGCGCAATA TGTGGGAAAT GTCTCTGTTC CACTCCTTTG TACCAGTGCT TTGGACGATC CAGTTTGTAA TAGGGAAGCT ATTCCTTGGG ATGAATGTAG TAGCACGCTG CGATGGGTCT TCATGTATCA TGAAACTGAT ATTCCAATGT CTCAAATTTT GCAGGGCAAA CAAAACATAG TTCTGGCAAC CACAGCGTCA ACACGCCGAA CAGGGCCATT GTAA 
Length1374
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8196897.. 8200348
Download Sequence
A.thaliana
AGI-codeAT1G50130.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Virus0615
6.32456 Virus3160
7.74597 Ahg943164 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
9.79796 Ahg344317
12.7279 Virus3178
16.0935 Ahg952447
17.3205 Ahg917508 cyclic nucleotide gated channel 5
19.5959 Virus3294
21.8403 Ahg925283 Protein of unknown function (DUF784)
22 Ahg322539 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression