Detail



ID : Ahg342459

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|342459|fgenesh1_pg.C_scaffold_3002222
Sequence
ATGAACCACC GTGACAAACA GATTGATTCC GGCTCTGGCT CCGGCTCCAG CTCTGGAGAT AACCGCCGGA CTTACGACTG CAACATTTGC CAGAGAGGCT TCACGAATCC TCAAGCTCTC GGTGGTCACA ATAACATCCA CCGCAGGGAA CGCGAAAGAT ACCCCTCCTC CTCTTTTTCT TCTCACTCAT TTCCATTTTC TCTGCCTTTA CTGTCTCAGT ATCCATCCTC CTCCATAAAC TTCACAAACC CTAATAATAA CAACAACCCG CCTCCTTATT TTCCGACCAT TGAGTCATAC CAACACCAAG GGTCTCAGCC ACCGATTAAC CCTAGCCACA ACACACAATA CTTTGGATCA TCATCATCAT CAAGAGGAGG AGGGAGATTT TCTCAAGGGG ACTATCATGA TCTCAATTTG AGCTTAGGGC TCGGATCCAT GAATGACAAT GATGACACTT ACCAGAGCCC ACCAGAGACT GGAGGTTCTC AGCCCCAAGA TGAGGATCTT GATCTTGATC TTCGACTTGG CGATCAAATA CGTTTGAGTA ATGTTCTTGT TATATTTGTT TATCTTAAGG TTCGTAACAA CTACACTGGA AAAGTCTACG TTGTTGCTGA ATCTCGATTG TCATCCCTTC CCATCGATAA GCCTAAGGCC GAAACTGCTG GTGATACCAA GAAAGTGAAA GGTGCTAAGC CTGAAAATGA AGAGGATTCT TATCAAGTTT TGGAAAAATT TAATGGAGCT TCCTTGGTTG GGAAAAAGTA TGAACCTTTG TTTGACTACT TTAACGATTT CTCAAGTGTG GCTTTTCGAG TAGTAGCCGA TGATTATGTC ACTAATGATA GTGGTACTGG TATTGTCCAC TGTGCTCCTG CTTTTGGCGA AGATGACTAT CGTGTTTGTC TTGAAAATAA GATAATTAAT AAGGGAGAGA ATCTAGTTGT GGCTGTTGAT GATGATGGGT TGTTTACTGA GAGAATTACC CACTTCAGTG GCCTTTACGT CAAAGATGCA GACAAAGATA TAATTAAAGC TGTGAAGGCC AAAGGCAGGC TTGTTAAGTC CGGGAGCTTT ACTCACTCAT ATCCATTCTG CTGGCGATCA GACACTCCTC TCATATATAG AGCAGTTCCG AGTTGGTTTG TACGTGTGGA GCAGTTGAAA GAAAAATTGT TAGAAAACAA TGAAAAGACG AAATGGGTAC CTAAATATGT GAAGGATAAA CGTTTTCACA ATTGGCTTGA AAATGCAAGG GATTGGGCAG TCAGCCGAAG TAGATTTTGG GGAACGCCTC TTCCGATATG GATCAGCCAT GATGGAGAAG AAGTTGTGGT CATGGATTCA GTTGAGAAGC TTGAAAAGCT TTCTGGTGTC AAGGTATTTG ATCTGCATCG TCACCATATT GATCAAATTA CAATCCCATC TAGTCGCGGT CGTGAGTTTG GTGTGCTCCG TCGTGTCGAA GATGTATTTG ATTGTTGGTT TGAGAGTGGG TCAATGCCTT ATGCATATAT CCATTATCCG TTTGAGAACA AGGAGCTATT TGAGAAGAAC TTTCCTGGTG ATTTTGTTGC TGAAGGGCTT GATCAAACTC GTGGATGGTC CTTTCTTCCT AGTAATCTAG CAACTTTACA GTCATCAAAC GTTCTCGATC AGTGGATTCA CTCAGCTACG CAGACTCTTG TCAAGGATGT CCACGAAAAG ATGGATGAAT ATCGTCTTGA CACCGTGGTT CCTCTTCTCT TGGAGTTCCT TGACAATCTC ACTAACATAT ATGTTAGATT CAACCGCAAG AGGTTAAAAG GCCGTACAGG AAAAGATGAT TGTCACACTG CTCTTTCAAC TCTCTATAAT GTTCTCCTTA CTTCTTGCAA AGTGATGACT CCTTTTACAC CCTTCTTCAC TGAGACTTTA TACCAGAATC TACGGAAAGT GTGTGAAGGT TCTGAGGAAA GCATTCATTA CTGTAGTTAT CCTCAAGAGG AAGAAACGAG AGGGGAGAGG ATTGAGAAAA GTGTTACAAG TATGAAGAAA ATTATTAAAC TTGCTCGGAA CATTCGTAAT CGTAAGGGTG ATAAGCTTCA AGAACAACTA CCATTGAAAA CTCCTCTAAA GGAAATGATT GTAGTCCACC CAGATGCAGA ATTCTTGGAT GACATAACTG GAAAACTAAA ACAGTATGTC TTGGATGAAC TCAATGTAAG ATCTCTTGTC CCATGCAACG ATACTCTGAA GTATGTGTCA CTAAAAGCAG TACCAGATTA CAGTGTGTTG GGAAAACGAC TTGGAAAGTC TATGGGAATT GTTACACAAG AAGTTAGAAA AATGTCTCAC CCAGATATCT TAAGATTTAA GGAGACTAAG GAAGTCACTA TTGCTAATCA CTCGCTCAAG CTAACAGATA TCAAGATTGT CAGGGATTTC AAACGTCCAG ATGGTTTGAA AGATACAGAG ATTGATGCAG CTGTAGATGA TGATGTTATG GTGATTTTGG ATCTACGAGA AGATGAATCT TTGAAAAATG AAGGTGTTGC TCGTGAGATT GTCAATAGGA TCCAGAAACT ACGAAAGAAG TCTTGTCTGG AACCAACAGA TTTTGTTGAA GTGTACTTTG AATCATTGGA CATGGGTGAC TCTGTTGTGC AACGAGTTCT ATGCTCCCAG GAACAATACA TTAGGGAAAA AATTGGCTCC CCTTTGCTTC ATTCTACTTT GATGCCACCA GATGTAGTTA TAATATCTGA TGAGAGTTTT GAATTGAAAG AATCTAAATT TTCATTTAAG ATAAGTTTGG CTAGACCAGC TTTAAAGTTC AATGAAGAAG CTCTTCTCGC TTTGTACTCG GGAGATGTGA AATTCGCAAC CCGGCTCCAA ACATACTTGT TATCGAGGGA TCATTCAAAT TTAAAATCAG AGTTCCAAGC CGGAGATGGG AAGATAACTG CAAGTTGCAT TGAAAAGCTC CCAGTTGTGA TTGTGATTCT AGGAGAACAT TTGCATTTAA CAGTTGGTGA CTACTTGTTG AGCAAGAAGA ACGCGTGA 
Length3048
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9900729.. 9908241
Download Sequence
A.thaliana
AGI-codeAT4G10320.1
DescriptiontRNA synthetase class I (I, L, M and V) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.2474 Ahg898532
16 Ahg931891
19.8997 Ahg924465
25.6905 Ahg330566 expansin A26
33.0151 Ahg319861 GDSL-like Lipase/Acylhydrolase superfamily protein
34.1174 Ahg932542 RNI-like superfamily protein
40.3237 Ahg916047
42.4853 Ahg331717
46.4758 Ahg937043 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
47.8121 Ahg914860
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression