Detail



ID : Ahg330566

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330566|fgenesh1_pm.C_scaffold_7002793
Sequence
ATGAAACTCT TAGAAAAAAT GATATATGTA GAATTTTTGA TGATAATAAT GGCGGTGTGG GTCGTACCCA TGAGTTACGG TCATGGAGCG ATGATTCATG ATGCAGCCGA AGCACCCGAT GTAGCTGAAG CACCCGGGAT TAATGGCCCA AGCAAGACAC TCGACACTAA TTGGTATGAC GCACGGGCCA CATTCTACGG TGACATCCAT GGTGGAGAAA CTCAACAGGG AGCTTGTGGA TACGGTAATC TGTTTAGACA AGGCTATGGT CTAGCCACAG CAGCGTTAAG CACGGCACTC TTCAACGACG GGTACACATG TGGCGCTTGT TACGAAATCA TGTGCGCGCG TGATCCACAA TGGTGTTTAC CCGGATCTAT CAAGATTACA GCAACAAATT TCTGTCCACC AAATTACACC AAAACCGTTG ATGTTTGGTG CAACCCACCA CAAAAGCACT TTGATCTCTC TCTACCGATG TTTCTCAAGA TCGCCAAGTT CAAGGCCGGG GTTGTCCCAG TCAGATACAG ACGTGTTCTT TGTGCAAAAA CTGGTGGAGT CAAGTTTGAA ACCAAAGGAA ACCCTTATTT CTTAATGGTC TTGCTATACA ATGTAGGAGG AGCTGGAGAT GTTAAGTTCG TGCAAGTTAA AGGAAACAAG ACCGGGTGGA TAACAATGAA AAAGAACTGG GGGCAGAATT GGACCACTGA TACAGTATTG ACCGGCCAAG GTTTATCGTT TAGGGTTACG ACGAGTGATG GGGTTACAAA AGATTTTATT AATCTGATGC CAAAAAATTG GGGATTTGGA CAGACTTTTG TTGGAAAGAT TAACTTTTAG 
Length840
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21927284.. 21928512
Download Sequence
A.thaliana
AGI-codeAT5G39290.1
Descriptionexpansin A26
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP26][ATHEXP ALPHA 1.16][EXP26][EXP26][expansin A26][EXPANSIN 26]
Gene coexpression
MR
MR Locus Description
15 Ahg352144 F-box and associated interaction domains-containing protein
20.4939 Ahg939174 F-box and associated interaction domains-containing protein
25.04 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
25.4951 Ahg899422 Bifunctional dihydrofolate reductase/thymidylate synthase
25.6905 Ahg342459 tRNA synthetase class I (I, L, M and V) family protein
41.497 Ahg349490 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
42.9884 Ahg329741 Protein of Unknown Function (DUF239)
43.2435 Ahg916294
46.7333 Ahg487747 laccase 14
47.9583 Ahg350386 Subtilase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression