Detail



ID : Ahg342640

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|342640|fgenesh1_pg.C_scaffold_3002403
Sequence
ATGGGCATTG CCGCGAAAGA GATCATCGTA ATATTATGGA AAATTCTTGG ATATTCGATG AACATGAGCA TCAAATTCAT GAGAAACCAC CCAATATTGT CAAGGGTTTC AATGTTTTTA CTTGTGCTAT ACATTTTCCT CCCTACTCTC TTGTTCTTCT TGATTTACTC GTCACCGGTT CTTGCATGTG CTCTAGTGTA TGCACGAGAA AAGCTAGGAT TAAGATTCTC AAGTTCGTAT TCAGAGCCAA AGAAGAGTTG TGGTGGAGAA AAGAGATGTC ATTTAAAACA ACAACGAAGT GTCCGACGAA ATGCTCGAAT GAAAGTTGAA GAATGGGATT CACAAACAAG CGAGGAAGAG AAAGACAAAG TTATCTTGAC TTCTCTTTAC AATGACCTCC TTGGTCGTAC TCCTCATTTC GAGGAGTCTC CAAAAGCTTT AGAAACCAAT GTAGTAGAGG AAGAAAACAA TGAGAAGGAG TTTCTTGGAG AGGAAGATTC TCGTGATTTA GGTCAACTTA ACGTTGAAGA ACCAATGGTT TGCAACTGTG AGATCAAATA TGGAGAATCA GATGGTAAAG AAGAGATGAA AGAGGAGATG AGTAATGTTA ATGAGCAGGG GATTTCAGAG ATTGAGAGAA ATAAGAGACT AGAGAGCTTA ATAGCTAGAA GAAGAGCGAG GAGACTCTTT AGACTAGCTT TAGATCAAAG GAATAAGCTT CAAGCTGAAG AAACAACTAG CCCTAGACAG AACAACACCA ACAGCCTTCA CGTTACGGTT TCGAGGAACT CACTTGAAAA ACGTCGAAAT AATTCATCAG ATGGTACTAC TGTTAAAGGA TTACCGATTC CAGGCTCAGC TCCTTCTGTG TTGTTACAAG GAAGAAACCC TTTTGACATA CCTTATGATC CTCAAGAAGA AAGACCTAAT CTTACTGGAG ATAGCTTTGA TCAAGAATTT TCATTGTTTA ATCAGAAAGA TATGTTCTTT TGTCGTCATG AGAGCTTCTG TCGTTTTGCT CTGTTTTCAC CAGAACATGC TCAATGTATG AACAGCCCAG TTTCTGCTTC AGACATTTCA ACTACTAGGA AACGTTTAGA TTTGGACAAT GAATATATGG ATCATACTGA ACAAAATCTC CCATGTAATG GAAAGGGAGC TACAATAGAA GACGACGATA AAAGCGTTGT GAGTGGAAAA AGCGAAGAAA GGGAGGTAGA AATGAATGAT AATGAGACAG ATTCAAACAA AGAAGAATGT GATGATTCAA GTTGTTCAGA AGAAAGTGAG TCAGAACTCA GCCGTTTAAA CAAAGCCGAG CTCAGGGAAG CTATATGCCA ATCGATGGAT AACAATCCCG GTTATCTTGT GAACCAAACA AGAAATAGTA TTCCAACCAC ATTGCCTAGA GGTTTAGTAG CGCCAAGACT AGATGATAAC AACATGTTTT ATGCTCGAAA ATGCGGAAAT TCGCACAGTC GAACATTTTC AGTTGCCTCG GATATGCAAG TTGAGGTTTC AGAGATTGGT TCACCTCCTA CAACAGTTGA TTGGCTTGAT GACTGGTCTA ATGGCGGTGA ATCTTACATT TATGATACAG ATATTGACAG AGAAATCGTC CGCGATGAAG AATCACGTAA GAGGATCTCT CACCAGTATG AATCAAGAAG TGGAATAGGA TCAAAAGAGG AGAATAATGA GACATGGACT AAACCTGAGG CCAAACCAAA TCAGAATTGT GTGGTAGATG AAAACCTTAT AACAGTTGAT GATGATTTGT CATTGTTAGA AAGAAGAAGC CAAACCGAAG AGATTTTTGA GCAGACACCT TCTAGTTCCA ATGATGTGTC CAAGCCTACA AGCTCTGGGA AATTTGAAGG TATGTTGTTC CATACAAGTG CGTCATTGTC GTCTATAACA GAAGAGCCTG AAACAATCTT GGACTCGATC GATGGGGGCA ACTCGGAGAA TCTGAATAAT TTGACTGAAG AACTTACTGA CCAGAGACCT CTGACTACTC TGGATTCATC CATGAAGAAA TTGATTGATG AAGAAGTGGC TGATGTGAAA CAAGTAGAAA ATGATGATCT TTGTGGATCT CCTAAGATTA TTGATTTAGA TATCATTGAT CATCAGCAGA AAGACCAAAT GCTGAGTAGC ATTCAAGGAG AACATGGGGA AACTAAGAGC TTTTTGGATG CTTCTTTGGA CACATCCTAT ATAGAATCAT TTGAGAGAGA GTTAGAAGGA GAAGAAGAAT CAAACTTAGA CAAGCTTACT AAGGAAACAA CAAAACAAAC AGAAAATGAG GTACATCAAA GTGATTTAGA GAGTTCTCCA TGCCAAGTTC TTACAGAATT ACTAGTAAGT GAGATTATGG AAGAGAATGG TCAGGAATTA GAAGAAGAAG AGAAACCAAG GTCAGTAGAA GAAGAGAAAA CTCATAATGT GGTGGAAGAA TCTTCGAGCC ATGCTCATAC ACAGTTGGTT GAAGATTATG GAAACGAAGA AAATGCTAGT GATGTGATAC TTCTGCAAGT TCAAGATAGT AATAACTCAC CACTAGATGA GTCAACTGAT CAGGAGGTCT CTAAGGAAGG AGAAAAAACA GAGTTATTGG AAGATTTTTA CGGTGAATCT TCTGAAGTAT ACAAAAATAG AGCGAATGCT GAGGTCTATG GAAACGCAGA AAACGCTAGT GATGTGACAT TTCTGCAAGT CCAAGATGGT AATTACTCAC CACGAGATGA GTTATTGAAA GATTTCTATG ATGAATCGTC CCAAGAATAC AAAAATAGAG CTAATGTTGA GGAAGAATCA GTAGTTTTAG CCAACACTCA AAACTCACAA GATTCACAAA CATGGACTCA ACAGTGTGGT ATAGATTCTT CCCAAGGGAT ATCACCAAGA ACGTTGGAGA TCACCCAACA ACTAGAGAAA GACGATGTTA TTGATCCAAA TGCCATCTCT CAAGTTATTG ATACAGATGA ATTTGCTGCA GTAGCCAACG ACGTAGCTGC TAGTCACGGT TTCGAATCCC ATACATGTTG A 
Length3051
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11312936.. 11316445
Download Sequence
A.thaliana
AGI-codeAT5G58880.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg916487
3.16228 Ahg916231
4.47214 Ahg893297
8.48528 Ahg480976 SAUR-like auxin-responsive protein family
14 Virus1179
16.9706 Ahg916376 FBD, F-box and Leucine Rich Repeat domains containing protein
17.3205 Ahg895600 Ubiquitin-like superfamily protein
20.7846 Virus1214
22.4944 Ahg930712 F-box and associated interaction domains-containing protein
22.8473 Ahg915091
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression