Detail



ID : Ahg343486

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|343486|fgenesh1_pg.C_scaffold_3003249
Sequence
ATGAATAACC AGAATGTAGA TGATCATAAT CTTCTACTCA TTTCTCAGTT GTACCCTAAT GTCTATACTC CATTAGTACC ACAACAAGCA GGAGAAGCAA AACCAGCGCG GCGGAGGAAA AGGAAGAGCA AGAGTGTTGC GATGGCAGAG GAGGGTGGAG CCGGAGGCAA TGGGTGGTTT AGAAAGAGAA AATTGAGTGA TGAGCAAGTA AGAATGTTGG AGATTAGCTT TGAAGATGAT CAAAAGCTTG AATCGGAGAG GAAAGATCGG CTTGCTTCGG AGTTAGGGCT TGACCCTCGT CAAGTCGCCG TCTGGTTCCA GAACCGCCGT GCACGGTTTA AGAACAAGAG AGTTGAGGAT GAATACACTA AAATCAAAAA CGCATATGAA ACCACCGTCG TTGAGAAGTG TCGTCTTGAT TCTGAGGTTC TTCACCTTAA GGAACAACTT TACGAGGCTG AAAGAGAGAT CCAACGGCTT GCACAAAGAG TTGAAGGAAC TTTAAGTAAC AGTCCCATCT CATCCTTTGT GACCATTGAA GCCAATCATA CGACACCGTT TTTTGGAGAT TACGACATCG GATTTGACGG TGAGGGTGAC GAGAACTTGC TCTACTCGCC AGATTACATT GATGGATTAG AATGGATGAG CCAATTTATG TAA 
Length663
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21552945.. 21554514
Download Sequence
A.thaliana
AGI-codeAT2G18550.1
Descriptionhomeobox protein 21
TAIR curator summaryEncodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Alias[ATHB21][HB-2][HB21][homeobox protein 21][homeobox-2]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg344079
22.8035 Ahg497265 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
49.2341 Ahg941423 Protein kinase superfamily protein
58.515 Ahg905462
60.4235 Ahg899929 Bromo-adjacent homology (BAH) domain-containing protein
61.041 Ahg936699 Protein of unknown function (DUF1216)
61.4817 Ahg917744
62.7853 Ahg351608 Protein of Unknown Function (DUF239)
65.9394 Ahg914199 Plant invertase/pectin methylesterase inhibitor superfamily
66.5357 Ahg917562 Ribosomal protein S5 domain 2-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression