Detail



ID : Ahg344010

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|344010|fgenesh1_pg.C_scaffold_4000352
Sequence
ATGGAACAAG GAGATCATCA ACAGCAGAAG AAAGAAGAAG AAGCTTTGCC GCCGGGTTTC AGATTTCATC CAACTGATGA GGAGCTAATC TCATACTACT TGATTAATAA GATCGCCGAT CAAAACTTCA CCGGAAAAGC AATCGCCGAC GTTGATCTCA ACAAGTCCGA GCCATGGGAG CTTCCTGAGA AGGCGAAAAT GGGCGGAAAA GAATGGTACT TTTTTAGCCT CCGAGACCGG AAGTACCCGA CGGGAGTGAG GACGAATAGA GCAACGAATA CAGGATATTG GAAAACCACG GGGAAAGACA AAGAGATATT CAATAGCACA ACCTCGGAGT TGGTCGGGAT GAAGAAGACT TTGGTCTTTT ATAGAGGACG AGCTCCTCGT GGGGAGAAGA CTAGTTGGGT CATGCATGAG TATCGACTTC ACTCTAAGTC CTCATATAGA ACCTCCAAGC AAGACGAGTG GGTAGTGTGT AGAGTGTTCA AGAAAACAGA AGCAACCAAG AAATACATAA GCAGCAGTAG CAGCAGCACA AGTCATCATA ACCATAACCA CAATCACACA AGAGCCTCAA TACTCTCATC AACCAACAAC AACAACACTA ATTACTCATC AGACCTCCTT CAACTCCCAC CGCATCTACA ACCACACCCG AGCCTCAATA TCAACCAATC CCTCATGGCT AACGCCGTTC ACCTAGCCGA GCTCTCTAGA GTCTTCCGTG CCTCCACAAG CACCAACATG GACTCTGCTC ATCAGCAGCT AATGAACTAC ACCCACATGC CTGTCTCAGG GCTCAGTCTA AACCTTGGCG GTGCACTGGT CCAGCCGCCT CCTGTTGTGT CACTCGAGGA TGTTGCCGCG GTTAGTGCTT CGTTCAATGG GGGAAACGGG TTTGGAAATG TGGAGATGAG CCAGTGCATG GACTTGGATG GATACTGGCC ATCTTATTGA 
Length960
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2631274.. 2634355
Download Sequence
A.thaliana
AGI-codeAT2G24430.1
DescriptionNAC domain containing protein 38
TAIR curator summary
Alias[ANAC038][ANAC039][NAC038][NAC domain containing protein 38][Arabidopsis NAC domain containing protein 39]
Gene coexpression
MR
MR Locus Description
30.8221 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
40.939 Ahg943871
42.45 Ahg906417
54.0278 Ahg936571
74.9133 Ahg915751 Uncharacterised protein family (UPF0497)
78.1025 Ahg493352 HXXXD-type acyl-transferase family protein
90.0333 Ahg474043 Oleosin family protein
92.9785 Ahg917939 floral meristem identity control protein LEAFY (LFY)
93.771 Ahg946490
94.3398 Ahg917658 subtilase 4.13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression