Detail



ID : Ahg344649

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|344649|fgenesh1_pg.C_scaffold_4000991
Sequence
ATGGTACTCT TCGCTTTATC AACGACTTCT TCTTCTTCTT CTAAGCTAAA ACAACATTCA CACCAAAGCT TTTTAGAGTC TCTAATGGAA GATAGTCTCG AAGACGCTGA ATCTACCATA AACCAATGGA TTTCACCGGA ACTCGTCGAT GCTTCTTCTT TCTGCTTCAT CTCATCGCTA TTTTCAACCG AAAACCGCGA AGAAGCCAAA CGATTCATCA ACACTGTAAA CAACTTACAC TCCGGTATGA TAAGACTAAT CTCAGTAAAT CCAACGTCAA CGAAACTCGT TAAAGCCGAG AATCTAATGC GAATCTCCAT GAATCATCTC TCCAAAGAGT TTTACCGCAT TCTTAAATCA AATCGACGCT ACCTCGACCC CGAATCCGTC TCTATCCGTT CTTCAAAAGC TTCCGATTCC GACTCCGATG TCATGAAAGA TTTAAAGATG ATCGCGGATT GTATGATATC ATCCGGATAT AGCAAAGAAT GCTTTAAAAT ATACAAGAAA ATCCGTAAAT CGATAATCGT CGAAGCGATA AATCAACTTG GATTCGAGAA TCTAACGTTT TCGCAGATAC AGAAACTTAA ATGGGAAGTT ATGGAGAAGA AGATACGAAA ATGGTTACGA GTTACAACAA GAACTGTGAA TACTCTGTTT TCCGGCGAAC GAATCCTCTC CGATCACGTC TTCTCTTCAT CATCATCATC AATTCGTGAA TCTGCATTTG CAGAAATCAC ATTACAAAGC GCTTTAGCTT TGTTCACTTT CCCGGAAAAA ATGGCGAAAT GTCGAAAATC TCCGGAGAAG ATCTTTCTGA CTCTCGATGT TTATCAAACA ATCATCGATC TATTGCCTAA GATTGACGAA CTCTTCAGCT CCGATTCAAC CTCCACCGTC AGATCACAAA TCGCTTTAAG TTTAGCAAAT CTCAGAGAAG GTGTGATTTC GATGATCGAT GAATTCGAAT CTTCGATTTC GAAAGAATCG TCGAAATCGT TAATCTCCGG AGGTGGAATT CATCAATTGA CGAGGTATGT GATGAATTTC ATCGCCTTCC TCGCTGATTA CAGTGATACA CTCTCCGATA TCATCTCGAA ACCGTTGTTA CCTTCACCGG AAGAAGAAAG CTCCGGTGAT TCATCTCCGG TGAAATCGCG AATCGCGTGG CTGATTTTGT TCTTACTCTG CAAAATCGAC GCGAAGTCTC GTCTCTATAA CGACGTAGCT CTCTCGTATC TGTTTTTGAT TAATAATGTT AATTACGTTG TTGTTAAAGT CCGATCGTCG AATCTGAGGA TGGTTTTGAG TGAGGATTGG GTTAAGAAGC ATGAAGGGAA GGTGAAGAAG TACGCCGGAA AGTTTGAGGA GATTGTTTGG GGAGAGGTGA TGACGTCACT TTCTGATGAT GTGACGACGG CGGAGGAGAG GATTAGACGG TTTAGTGATG GGTTTGAGGA AGCGTATAAG AGGCAAACCG GTTGGGTTGT ACCGGATTCG AAATTGAGAG ATGAGATTAA ACGGTCTGTG GGGATGATGA TTATACCGAG ATATTCGGGT TTTTGTGAAA GGTATCGGGT CGGGTTATTA GAGAATGTCG GATTTGCCCC TGAGGATATT GGGAATTATC TTTCGGATTT GTATTTTGGG TCTCGTGGAT CAGGGAGTTC GTCTTTTCAT TCTTCTGGTT CCTCTGTTTG A 
Length1701
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12290868.. 12292568
Download Sequence
A.thaliana
AGI-codeAT2G28650.1
Descriptionexocyst subunit exo70 family protein H8
TAIR curator summaryA member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Alias[ATEXO70H8][EXO70H8][exocyst subunit exo70 family protein H8]
Gene coexpression
MR
MR Locus Description
38.6264 Ahg354612 gibberellin 3-oxidase 3
48.9081 Ahg924267 proline-rich protein 1
54.3139 Ahg917939 floral meristem identity control protein LEAFY (LFY)
78.8416 Ahg335836 EF hand calcium-binding protein family
92.0326 Ahg949154
96.1873 Ahg495065 ethylene response factor 110
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression