Detail



ID : Ahg344884

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|344884|fgenesh1_pg.C_scaffold_4001226
Sequence
ATGGATATGA TTCCCCAATT GATGGAAGGC TCTTCAGCTT ACGGAGGTGT CACAAACCTC AACATCATCT CAGACAACTC CTCTTCCGTC ACCGGAGCCA CCGCAGGTGA AGCAACACAA CCACCGTCTT CTTCCTCCTC ACCATCGGTG AACTCAAGCC GTTACGAGAA CCAGAAGAGG AGAGACTGGA ACACGTTCGG GCAGTACTTA AGGAACCATC GGCCACCGCT TTCTCTTTCC CGATGCAGTG GAGCTCACGT GCTCGAGTTC CTCCGTTACT TGGACCAGTT CGGTAAAACA AAAGTTCACA CGAACGTTTG TCACTTCTAC GGCCATCCTA ATCCTCCGGC ACCGTGTCCT TGTCCTCTCC GACAAGCTTG GGGAAGTCTT GACGCTCTCA TCGGTCGTCT TCGAGCTGCC TTTGAAGAAA ACGGAGGCAA GCCTGAGACG AATCCTTTTG GAGCTCGTGC CGTTAGGCTT TATCTAAGGG AAGTTAGAGA TATGCAGAGC AAAGCTAGAG GTGTTAGCTA CGAGAAGAAG AAGCGAAAGC GTCCTCTTCC TCCGTCGTCG GCTTCTTCTT CCTCCGCCGT AGCTAGTCAC CAGCAATTTC AAATGCTATC GAGTACTAGT TCTACTTCTC AATTAAAGTT TGAGAAGCTG TGGTTCAGTT TTAGAAGAAC TTCTGTTACT AGTGGTATGT TGGGGGAAGG AAGGTAG 
Length717
Protein Sequence
Protein Residue
Map Locationscaffold_163: 5287.. 6101
Download Sequence
A.thaliana
AGI-codeAT2G31160.1
DescriptionProtein of unknown function (DUF640)
TAIR curator summary
Alias[LSH3][OBO1][LIGHT SENSITIVE HYPOCOTYLS 3][ORGAN BOUNDARY 1]
Gene coexpression
MR
MR Locus Description
36.5513 Ahg489119 F-box/RNI-like/FBD-like domains-containing protein
67.1416 Ahg931060
84.2674 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
90.8845 Ahg494280 Peroxidase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression