Detail



ID : Ahg345960

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|345960|fgenesh1_pg.C_scaffold_4002302
Sequence
ATGGAGGGTG TCAACGCCGG AAGAGAGCGG AGTTTTCGAG CGGCCTACAA CCGCATGCGT GATTTCTCCC GATCAATGGA GATTCAATGC AATGCTCAAG TAGCATTGAT TGCTTACTCT CCAGATGTTG GGAGAGCCGA GACCTATGCA TTTCCAGGTA TTAATGAGGT GATGGATCGA TTTGGTTATG AGCCTAAGGA TTTTGGGATG ACTCCGTTTC AGAGGTACAC TGAGGCCTTG GCCGGTGTTA CCGGTCCGGT GACTCTGACA CAGAGGACGA CAGAAGAGTT GGAAAGCCTG CGTGAACGTC TGAACGCAAT CATCGCTTCA TCACTTTCGG AGCAGTTGAA CCGTGCCCAT CTCCATCACG GAGATCTCCA AATGACGGTA GAGTATTATG CACATGCTGC TGCTCCTAGG CAGAGAAACT TAATGCTGAA GCAGCTACTG ACTGAGATTC TGCCTCGAGA ACGCGGTCTT TGCTTTTTGC TTGGGGCAAG AGGTTCTGGT GAAGAAGGTC AGCTTGGAAG ATTTTTCCCT GATTCTAGAT TGAGACAACA GTTCTTGGTC GAAGCTGCAC ATCAATGTCA AGAAGCTGGA TTATATGACA AATATGTATG TCTTTCAATA GAGCTGTCAC CATGTTTTCC ATCTTCTCAG TCCATAGAGA TACAGAAGAG GGTGGGTGCA TTTTCGGCTG CCTTGGAGAC TATAAACAAG TGTCTATCTG AAGCCATCTG TTCTTTTGCC CGTGGAAGGT TGGATGGTGA AAGCAGAACA TCAGGGCTTA TTCTTGCAGG GAACGATATT CTTCAGACTT ACAAATATTA CCCTGGATTC AGCAGGATTG GAGAAAAGAA AAAACGTGAC TTCCTTCAGA GCCTCAGCAG AATATCAATG CTACCTAAAA CGAATTTGAT TGATACAAGC AGAGAGGCTC ATGCTGGTCA ACTAGTGCCG GTGGCTTCGA GTCCTCCAAT ATCCTCAACA CCAGGCAAAG AACTCGTGGC TCTGGCTAAC ATACCCATTC ATGAGAAAAA AGCATATGTG TATGGAGAGG TTGTGAAGAT ACTTAACACT TCAAGAGAAT GA 
Length1092
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19324477.. 19326468
Download Sequence
A.thaliana
AGI-codeAT2G41620.1
DescriptionNucleoporin interacting component (Nup93/Nic96-like) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.69042 Virus0615
7.74597 Ahg354556 F-box family protein with a domain of unknown function (DUF295)
18.2483 Virus0906
18.5472 Ahg952447
31.4325 Ahg359456
33.6749 Ahg948922 Protein of unknown function (DUF784)
36.8375 Virus0457
37.6298 Virus1600
38.4578 Ahg911093 20S proteasome beta subunit E1
40.5339 Ahg952497 low-molecular-weight cysteine-rich 76
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression