Detail



ID : Ahg347446

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347446|fgenesh1_pg.C_scaffold_5000838
Sequence
ATGAATCTTT CTCCGTTCAA GAAAGATATC GATGAGCTCA TAGACGAGTT TGCAGAGGGT GATTTGACAA CGTTTATTGA TATGAAGAGC GTTTGGCTAT CCCGAAAGTT TTCTTATGTA TATGATGCTA GTCCTACCAG CAACTTGGCC TTTTTCATGC AGTCACTATA TGCACATACA ATCGGTCACA TGGTTAGTAT TGATTCTTTT TCACGAAGAC TTGGAGGTCT TTACTGTCTC TATTGCCTTC ATGAGATCCA ACCCTTTAAA CCCAAGTTCA GAATTTATAT CTCACTTGAA GAGCTCGGGA AATTTAGGGA CCTTGTAGTT GAGGCAAAAG ATAAAGGTGT AGAGATAGTT GCTGCTGTGG CAAAACAAAT GCTTGATAAG AACATGTTTA TCTTTGGAGC TGTGGAGGAA ACTTTTGCAA CCATGAAACT TAATCAATTA ACAGAGCTAC AGAACGCACG TGTGCGGTTT GCCTATGATA GGTTAATCTC TGACACTACT ATTGAGCAAT ATATTCATTT GGATATGGGT AAGGAAGTTA ATCTGAATTC CCTAGATGAA ATGTCTATAG AATATGCAGA GGCCAAGAAG CGTGCAATCG AAGGTGCAGG AGAAATAATG GAGATTGAGG ATATAAAGCA CATATCAGAA GAGAAAGAGA TGATGGGAGA GAGAATGGAG AAAATGAAAG AAGAATGGGA TTCACAAAGA CATTCATTTT ATGAACAAAC CAAGCTTGAT GGTCTTACTA CGACACCGAA ACTGTTGAAA GATGTGGAAC ATGATGAAGA TGATGGGTTT GATGAGCTTG ATCGCTTACT TTCTCAAAGC TAG 
Length843
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9634673.. 9636408
Download Sequence
A.thaliana
AGI-codeAT3G53270.1
DescriptionSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
30.8545 Ahg483293 Chaperone DnaJ-domain superfamily protein
46.2061 Ahg482040 Plant protein of unknown function (DUF828)
64.7843 Ahg494441 solute:sodium symporters;urea transmembrane transporters
66.9776 Ahg934176
89.9778 Ahg337666 cellulose synthase like E1
95.3677 Ahg496112 myb domain protein 59
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression