Detail



ID : Ahg347642

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347642|fgenesh1_pg.C_scaffold_5001034
Sequence
ATGGAAACGA TAATACTTCA TGAAGTTAGC AAAGATATGC CTGCGACTTG CTGTATCTGT TTCGACCATG ACTTGGAAGC TGAGCAGATG TTTTCTGTTT ATTTATGCCG TCATCAATTC TGTGTGGAGT GCGTGAAACG ATATATAGAA GTAAAGCTAG TTGAGGGAGG TGTACTAAGA TGTCCTCATT ATCAATGCGA GTCTAAGCTA ACTCTTAGAA GTTGTGACAA TATTTTGACA CATAAACAAA GAGACATGTG GGAACGAAGG AATAGAGAAG AATCAGTTCC TGCGACGGAC AGGGTTTACT GCCCAAATCC AAGGTGCTCG GCTTTAATGT CGAAAGCCGA GCTCTCCAAA TCAACTAAAG AAGCTGGAGT TAAGAGACGT TGCGTCAAAT GCTCTCAACC TTTCTGCATG AACTGCAAAG TTTTGTGGCA TAATAACTTG TTGTGCGACG ATTATATGAG ATGTCATCAT ACGGCAGATG ATATGATGCT AAAAAATCTA GCAAATCATA ATATGTGGCG TCAATGTGTA AATTGCCAAC AGATGATCGA ACGTTCAGAA GGATGCATCC ATGTGCGGCT ATTCGTTTTG CTACACATGT GGAGAAGAGT GGAAGCATGG AGGTTGCCCT CATCGAAGAA ATATGATTGC GGAAGATTGT GCAGTGTGTA CATGTTGTAG 
Length690
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11468903.. 11469716
Download Sequence
A.thaliana
AGI-codeAT3G43750.1
DescriptionRING/U-box protein with C6HC-type zinc finger domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
31.749 Ahg912952 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
33.541 Ahg936864 Apoptosis inhibitory protein 5 (API5)
42.332 Ahg323966
66.4906 Ahg924757 MIF4G domain-containing protein
79.4481 Ahg483677 LOB domain-containing protein 18
82.5772 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
99.1968 Ahg325399 MEI2 C-terminal RRM only like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression