Detail



ID : Ahg347705

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347705|fgenesh1_pg.C_scaffold_5001097
Sequence
ATGAAAATGA TGCAAGAGGA GAACCGAAAA GGTCCATGGA CAGAACAGGA GGACATACTT CTGGTAAATT TTGTTCACTT ATTTGGAGAT CGACGATGGG ATTTTATTGC AAAAGTATCA GGTTTGAACA GAACAGGAAA GAGTTGCAGG CTAAGGTGGG TTAATTACCT ACATCCCGGT CTCAAACGCG GGAAGATGAC GCCTCAAGAA GAGCGCCTCG TCCTTGAGCT TCACGCAAAG TGGGGAAACA GGTGGTCGAA AATAGCCCGA AAATTACCGG GCCGAACGGA TAACGAGATA AAGAATTACT GGAGGACTCA TATGAGGAAG AAAGCTCAAG AAAAGAAGCG TCCTGTTTCG CCAACTTCCT CATTTTCCCA CTGCAGCTCT TCATCTATGA CCACTACAAC CACCAATACT CAAGATACAT CGTGCCACTC GCGGAAATCT TCAGGGAAAG TGAGCTTTTA CGACACTGGA GGATCCCGAT CCACGGGGGA GATGATGAGT CAAGAAACCG AAGACATATA CTCAATGGAT GATATATGGA GAGAGATTGA TCACTCAGCA GTAAACATAA TAAAACCGGT TAAAGACATC TACTCAGAAC AAAGCCATTG CTTAAGTTAC CCAACTCTGG CTTCTCCAAC ATGGGAAAGC TCATTGGATT CTATATGGAA CATGGATGCA GATAAAAGTA AGATGTCGTC TTCCTTTGCA AATGATCAGT TTCCTTTCTG TTTCCAACAC AGTAGATCAC CATGGTCGCC AGGTTAA 
Length777
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11791678.. 11792628
Download Sequence
A.thaliana
AGI-codeAT3G46130.1
Descriptionmyb domain protein 48
TAIR curator summaryEncodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.
Alias[ATMYB48][ATMYB48-1][ATMYB48-2][ATMYB48-3][MYB48][myb domain protein 48]
Gene coexpression
MR
MR Locus Description
20.445 Ahg926057
21.8632 Ahg922773 acyl-CoA-binding domain 3
40.6202 Ahg496112 myb domain protein 59
41.2311 Ahg483024 proline transporter 1
41.6173 Ahg926058
49.4166 Ahg919454 josephin protein-related
61.2372 Ahg925482
65.9166 Ahg316070 Calcium-dependent lipid-binding (CaLB domain) family protein
67.3721 Ahg934176
69.5485 Ahg895882 TRAF-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression