Detail



ID : Ahg347751

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347751|fgenesh1_pg.C_scaffold_5001143
Sequence
ATGGAGGAAA AGCAGGCGAG AAAAAGGGTC GTGTTGGTTT CAGTTTCAGC TCAAGGACAT ATATCTCCAA TGATGCAACT TGCGAAAACC CTTCATTCGA AGGGGTTTCT CAATCACAGT TTTTCAGACC AATTTGCCAC TATTCCGGAA AGCTTACCGG AGTCTGCTTT TGAGGATCTC GGGGCACTAA AATTTCTGCT TAAGCTCAAC ATAGAGTGCC AGGTGAGCTT CAAGGACTGC TTGGGTCAGT TGCTGCTGCA ACAAAGTAAT GAGATCTCAT GTGTCATCTA CGACGAGTTC TTGTACTTTG CTGAAGCTGC AGCCAAAGAG TTTAAGCTTC CAAACGTTAT TTTCAGCACA ACAAGTGCCA CGGCTTTTGT TTGTCGCTCT GTATTCAACA ACGTCTATGG AAACAACGGC ATAGCTCCCT CGAAAGAAAG CACAATGGAG CTGTATAGGA ATACAGTTGA CAAACGGACA GCTTCATCTG TGATAATCAA CACTGCGAGC TGTCTAGAGA GTGCATCTCT GTCATTTCTG CAACAACAGC TAAAAATTCC AGTGTATCCT ATAGGCCCTC TTCACCTGGT GGCCTCGGCT TCTACAAGTC TGCTTGAAGA GAACAAAAGT TGTATGGAAT GGTTGAACAA ACAAAAGGTA AACTCAGTGA TATACATAAG CTTGGGAAGC TATGCTTTAA CAGAAATTAA TGAGGTGATG GAAAGTGCTC TGAAGATAAG GTTGTGTCAC TGA 
Length753
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12107829.. 12109398
Download Sequence
A.thaliana
AGI-codeAT3G46658.1
Descriptionother RNA
TAIR curator summaryPotential natural antisense gene, locus overlaps with AT3G46660
Alias
Gene coexpression
MR
MR Locus Description
2 Virus2010
4.24264 Ahg925283 Protein of unknown function (DUF784)
5.09902 Ahg332331 Putative membrane lipoprotein
5.47723 Ahg901203 heat shock protein 60-2
7.48331 Ahg921006 Protein kinase protein with tetratricopeptide repeat domain
11.225 Virus0604
33.5708 Ahg355876 ENTH/VHS family protein
35.4119 Ahg916106 xyloglucan endotransglucosylase/hydrolase 3
45.9891 Ahg942630
53.2165 Ahg906436 Plant invertase/pectin methylesterase inhibitor superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression