Detail



ID : Ahg347883

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347883|fgenesh1_pg.C_scaffold_5001275
Sequence
ATGAGCAATA CAAAAAACAT CCACAAAGGG TTACTAGAGA GGTTTTTAGA TCTTCTCTTG ATCGCTCTTA TAATTTTCAT GACTCTAAAA GGCGGCACGA GTGGAGCTTG TGCCGCGTGC AAGTACCAAC GTAGACGATG CGCCGCGGAT TGCCCCCTCG CGCCTTACTT CCCAGCCGAA CAACCGAAAC TCTTCCAAAA CGTTCACAGG CTATTCGGCG TAAGAAGCAT CGTCAAGATC CTAGAAAAAC TCGACGAAAC TCAGAAACCA GAAGCCATGA AATCAATCAT CTTCCAGTCT TATGTCCGTG ACCGTTCTCC TGTATACGGC TGCCTCGGCG TCACGCAACA GCTTCAATAC ATGATATGGC TTGCTGAAGA AGAACTCAAA GCTGTCAATT CTCAACTACA ACTCTATCGC TCTCAACCAC AAAACGGCCA AAATCAAAAT CAAAACCATA ATAATCATAA TCAGATGATT CATGAGCTTG GTGGTGATAA TAAGCAGCAA GAAGATGTTA CATCGCAGCA GCTTGATTTG GGAATGGGAC TAAACGTTCA CAATAATCAG AGCAATGTTG TTACACCATT CTTTAGTCCA TTATTACCAG TATCTGAAAC ACAACAGCCA CAAATGTCTT ACACTTATAG TTGCAGTGAG GTTAACAACA ATGGCTATAG TCCTCCTGCT TACAATACAG ATTCAGGCAA GGAGATTCTG ACCAACAACA ATAATGTTTG GGGTGGTCAG AATCGATTTC TGTATAACGT CAACAATGGA GGAGGATTTA GCAACCAAAA CGAGAGCTGT CACGAGATGA AGAGTAATAA CGGTGTAATG GCAATACAAT CACAGCTCGT AAATCTGCAA ATGGCATCAA ATCATCAGCA AGTGGAAGAA GAAGAAGATG CTCATGAATA CGATGAGATC CATCAGTTTC TTGAAATCAT TGACGATAGG CAATCATTTG CGGATTCTAA AGAAGCGTAC GCGTCAAGCT CTGGTGGATC GTTGAAAGAA CAGATTGATG AAATTGGAGA GAATGAATTG AGAAGTGCAG CTACTTGCTT TAGTCTAACC AGTATGAATT GA 
Length1092
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12858165.. 12859352
Download Sequence
A.thaliana
AGI-codeAT3G47870.1
DescriptionLOB domain-containing protein 27
TAIR curator summaryRequired for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation.
Alias[ASL29][LBD27][SCP][ASYMMETRIC LEAVES 2-like 29][LOB domain-containing protein 27][SIDECAR POLLEN]
Gene coexpression
MR
MR Locus Description
12.4097 Ahg916283 Defensin-like (DEFL) family protein
19.1311 Ahg906642 ECA1 gametogenesis related family protein
21.2132 Ahg888434
23.8747 Ahg916200
28.1247 Ahg493891
36.4966 Ahg322360
36.8782 Ahg942500
46.0869 Virus0360
73.0479 Ahg951084
74.1755 Ahg924676
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression