Detail



ID : Ahg347994

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|347994|fgenesh1_pg.C_scaffold_5001386
Sequence
ATGAAGCACA ACAATGTCAT CCCTAATGGT CACTTCAAAA AGCACTGGCA GAACTATGTA AAGACATGGT TTAACCAGCC TGCTAGGAAA ACCAGAAGAA GAATTGCGAG GCAAAAGAAG GCTGTGAAGA TCTTCCCTCG TCCAACTTCT GGACCTCTCC GCCCTGTTGT GCATGGTCAG ACTCTTAAGT ACAACATGAA GGTCAGAACC GGTAAAGGAT TCACTCTTGA AGAGCTCAAG GCTGCTGGTA TCCCAAAGAA GTTGGCTCCT ACAATCGGTA TTGCTGTTGA CCATCGTCGC AAGAACCGAT CTTTGGAGGG TCTTCAAACC AATGTCCAGA GGCTGAAAAC CTACAAGACT AAGTTGGTCA TCTTCCCGCG TCGTGCTCGC AAGGTTAAGG CTGGTGACTC TACACCAGAA GAGTTGGCTA ATGCTACCCA AGTTCAAGGA GACTACTTGC CTATTGTACG CGAGAAGCCA ACCATGGAGC TCGTCAAGCT GACTTCAGAA ATGAAGTCCT TCAAGGCGTA TGATAAGATA CGTCTTGAGC GCACGAACAA GAGACATGCT GGTGCTAGAG CCAAGAGAGC CTCCGAGGCT GAGAAAGAAG AGAAGAAGTG A 
Length621
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13401186.. 13402196
Download Sequence
A.thaliana
AGI-codeAT3G49010.1
Descriptionbreast basic conserved 1
TAIR curator summaryEncodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).
Alias[ATBBC1][BBC1][RSU2][breast basic conserved 1][40S RIBOSOMAL PROTEIN]
Gene coexpression
MR
MR Locus Description
5.38516 Ahg496177 GTP binding Elongation factor Tu family protein
7.61577 Ahg941581 Ribosomal protein S8e family protein
7.74597 Ahg926602 40s ribosomal protein SA
8.77496 Ahg483941 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
10.3923 Ahg473757 ribosomal protein 1
11.1803 Ahg488362 Ribosomal protein S4
12 Ahg477755 Ribosomal protein S3Ae
12.0416 Ahg474678 homolog of nucleolar protein NOP56
12.1244 Ahg487065 Ribosomal protein L4/L1 family
12.3288 Ahg486792 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression