Detail



ID : Ahg348313

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|348313|fgenesh1_pg.C_scaffold_5001705
Sequence
ATGGCGACTT TCCTGACAAA TGTTGTTTCA ATCAAACCTA CAATCTTCTC ATTCCAGTCC GAATCCTTCA CCCCTTTGCA GACGAGGGCC AATGTATTCT CCTCGAAACC CTTTCCTTCT CTCGCCGGAA CCTTCTCCCG GAGCGCTAGA ACGAGATTCA TTCCTTATGC TGTAACGGAG ACGGAAGAAA AACCCGCTGC TTTGGACCCT AGTTCCGAAG CCGCCAGGCG TGTCTATATC GGTAACATAC CAAGGACAGT GACCAATGAG CAGCTCACTA AACTTGTTGA AGAACACGGT GCTGTTGAAA AAGTTCAGGT GATGTATGAT AAGTATTCAG GACGAAGCCG TCGATTTGGG TTTGCTACTA TGAAATCAGT TGAAGATGCG AATGCTGTGG TTGAGAAATT GAATGGCAAT ACCGTTGAAG GGCGTGAGAT AAAGGTTAAC ATTACAGAGA AACCTATAGC ATCATCATCT CCTGATTTAT CACTGCTTCA GTCTGAAGAT TCTGCATTTG TAGACAGCCC TTACAAAGTG TATGTAGGAA ATCTAGCAAA GACTGTTACA AAGGAGATGC TTGAGAATTT GTTTTCTGAG AAAGGGAAAG TTGTAAGTGC CAAGGTCTCA AGAGTACCTG GAACTTCGAA ATCCACCGGG TTTGGATTCG TAACTTTTTC TTCAGAAGAA GATGTGGAAG CTGCCATTTT GGCTCTTAAC AATTCGGCGA AGCCAAGCCA GCCAGAGATG CTTAGCTTGC AGTGTCTTCC TCCTTTCTTC ATCTCCGTCC CAAATCGGAG CACCAACTCT TGCTCAACGG CTCCAATTCG TGCGACCAGT GACTTCGCTG CTTCTCCGTC GTCCCCAATC TCTCGCCGTC TTATCCTTCT CCGTCACGCT CACAGTTCCT GGGATGATAT TTCCCTCAGA GACCATGATC GTCCTCTAAG TAAAACCGGA CAAGCCGATG CTGCCAAAGT AGCTCAAATC CTCTCCTCAC TTGGTTGGCT TCCCCAACTC ATTCTCTCAA GTGACGCCAC TCGCACTAGA GAGACACTGA GGTCAATGCA AGCGCAAGTA GATGAGTTTA TGGAGGCAAA TGTACATTTC ATTCCTAGCT TTTACTCCAT TGCTGCTATG GATGGCCAAA CCGCCGAGCA TCTTCAAAAC ATTATCTCCA AATATTCAAC CCCTGATATC TCCACTATCA TGTGTATGGG TCATAATAAG GGTTGGGAAG AAGCAGCCTC CATGCTCTCT GGGGCTTCTG TTAAGTTGAA AACATGCAAT GCTGCTTTGC TTCAGGCTTT TGGCAACTCC TGGGAAGAAG CTTTTGCGCT CTCTGGCCCT GGCGGATGGA AACTTGAGGG TCTAGTGGCT CCAGATAGTA GCATCTGTGT GTAA 
Length1404
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15097902.. 15100532
Download Sequence
A.thaliana
AGI-codeAT3G52150.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[PSRP2][plastid-specific ribosomal protein 2]
Gene coexpression
MR
MR Locus Description
7.68115 Ahg937391 translocon at the outer envelope membrane of chloroplasts 75-III
8.30662 Ahg484358 ribosomal protein L15
9.16515 Ahg478856 Pyridoxal-dependent decarboxylase family protein
9.8995 Ahg484572 ribosomal protein L12-A
11.3137 Ahg488058 Rho GTPase activation protein (RhoGAP) with PH domain
13.3417 Ahg949999 embryo defective 2737
13.7477 Ahg888153 S-adenosylmethionine carrier 1
13.784 Ahg493601 acetyl Co-enzyme a carboxylase biotin carboxylase subunit
14.4568 Ahg946663 dihydrolipoyl dehydrogenases
15.6844 Ahg482332 Ribosomal protein S5 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression