Detail



ID : Ahg349241

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349241|fgenesh1_pg.C_scaffold_5002633
Sequence
ATGGCGAGTG TTGAAGGTGA TGACGATTTC GGAAGTTCTT CGTCAAGGTT TTATCAAGAT CAACTATACA CAGAGCTATG GAAAGTTTGT GCAGGTCCAT TAGTGGAGGT TCCTCGTGCT GACGAGAAAG TTTTCTACTT CCCTCAGGGT CACATGGAAC AACTTGTGGC GTCAACTAAT CAAGGAATCA AATCAGAAGA AATACCTGTT TTTGATCTTC CTCCAAAGAT TCTTTGTCGA GTTCTTGGTG TCACTTTAAA GGCGGAGCAT GAAACAGATG AAGTTTACGC TCAGATCACA TTACAGCCAG AGGAAGATCA AAGTGAACCC ACAAGTCTTG ATCCACCTCT GGTTGAACCA ACTAAGCAAA TGTTTCATTC GTTTGTTAAG ATTTTAACGG CTTCAGATAC AAGCACTCAT GGTGGATTCT CTGTTCTTCG TAAACACGCC ACTGAATGCT TGCCTGCTTT GGATATGACA CAAGCGACTC CTACTCAAGA ACTTGTGACT AGAGATCTTC ATGGGTTTGA ATGGAGGTTT AAGCATATAT TCAGAGGGCA ACCACGGAGG CATTTGCTTA CAACGGGTTG GAGTACATTT GTATCCTCGA AAAGACTTGT AGCTGGAGAT GCTTTTGTGT TCTTGAGGGG CGAGAATGGG GATTTACGGG TTGGAGTGAG GCGATTAGCT CGGCATCAAA GCACGATGCC TACTTCGGTT ATCTCGAGTC AGAGCATGCA TTTGGGAGTT CTTGCTACAG CTTCTCATGC TGTGCGTACA ACAACAATCT TTGTTGTGTT TTACAAGCCT AGGATAAGCC AATTCATAGT TGGGGTGAAC AAGTATATGG AAGCTATAAA GCATGGATTT TCTCTCGGTA CCCGATTCAG AATGAGGTTT GAAGGAGAAG AGTCTCCTGA GAGAATTGTT CTTGATTCTG AAACCTGGAG TGTCTTCAGA TTTACGGGTA CAATTGTGGG AACCGGAGAT CTATCTTCAC AATGGCCAGC TTCTAAATGG AGGTCATTGC AGGTCCAATG GGATGAGCCA ACAACAGTTC AGAGACCAGA CAAAGTCTCA CCATGGGAGA TTGAGCCTTT CTTGGCAACT TCCCCAATTT CAACCCCTGC TCAACAACCA CAATCGAAAT GCAAGCGGTC AAGACCCATC GAGCCATCAG TTATAACACC AGCCCCACCT AGTTTCTTGT ACAGCCTCCC TCAGAGCCAA GATTCCATCA ATGCATCCCT TAAACTGTTC CAAGATCCAT CACTTGAGAG AAATTCAGGT GGATACTCCT CAAACAACAG CTTCAAACCC GAGACTCCTC CTCCTCCTCC TCGTCCAACG AATTGTAGCT ATAGGTTATT TGGATTTGAT CTCACAAGCA ATCCTCCTGC TCCAATCCCT CAAGACAAGC AACCGATGGA TACTTGTGGA GCTGCCAAGT GTCAAGAACC CATCACTCCA ACCTCAATGA ATGAGCAGAA GAAGCAACAA ACATCAAGAA GTCGAACTAA AGTGCAAATG CAAGGCATTG CTGTTGGTCG TGCGGTTGAT TTAACACTGT TGAAATCATA CGATGAACTG ATTGAGGAGC TTGAGGAGAT GTTTGAGATT CAAGGACAGC TTCGTCCTCG AGACAAATGG ATCGTTGTCT TCACAGATGA TGAAGGAGAT ATGATGCTTG CTGGAGATGA TCCATGGAAT GAGTTTTGCA AGATGGCTAA GAAGATATTT ATATATTCGA GCGATGAGGT TAAGAAAATG ACAACGAAAT TGAAGATTTC TTCGTCGTTA GAGAATGAAG AATATGGTAA TGAATGA 
Length1827
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19393783.. 19396773
Download Sequence
A.thaliana
AGI-codeAT3G61830.1
Descriptionauxin response factor 18
TAIR curator summary
Alias[ARF18][auxin response factor 18]
Gene coexpression
MR
MR Locus Description
14.3527 Ahg932640 cytochrome P450, family 82, subfamily F, polypeptide 1
14.9666 Ahg480193 O-Glycosyl hydrolases family 17 protein
21.9089 Ahg481491 Leucine-rich receptor-like protein kinase family protein
23.5797 Ahg477690 Li-tolerant lipase 1
24.1454 Ahg920798 plasmodesmata callose-binding protein 3
25.3969 Ahg472662 MLP-like protein 423
32.45 Ahg481792 Pathogenesis-related thaumatin superfamily protein
33.7639 Ahg485285 IQ-domain 21
35.4401 Ahg470654 Fatty acid desaturase family protein
35.7911 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression