Detail



ID : Ahg349490

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349490|fgenesh1_pg.C_scaffold_6000083
Sequence
ATGGAGAAAC AGGAAGTTTT GCAATCGGTG CAAAATAATT CTCCGGCAGA TTCAAAACTC AGAAGAAAGC TCATGGACCA ATTTGTGATT GATGCAGCAT ACGGCTGCTT TATGAGGACC GCAAATCCAT TCTTTGATTG GCGTCCGCTT AGATACCCTC ACAACTTGAC AAGATCTCTT CCGGAAGGGA TCACGCGCAA GGAGCTTGGT ATTATTAATC TCACAGCTCA GTTCATGGCG GTTTTTGGGA TTTTCTTCCA GCGGGCTCTG ATTAAGACGC AAGTTTTCTT TTTATTGTCG TCTCTTTCGT GGGTACTTGG CTTTATCAAA GCCTTGCCAA GACCTGCTAA GAATGCTGGT GCTAGTCCCG AGACTGTTCT TGAGGGGTTT TTCCATCTTC TTGCTCTATT GGAGGATGAT GAGAAGATTG GTATGGTTGA TTTGCATGTT TTTGAGTTTC TTGCTAAAAC GTTGGGTTAT ATGATGCCAT TCCCACTTGG ACACCTTTCA AATATGCTGC ATTCTCAGAT GATTGAACTT CTTAGGACAC CAATTCATTA TATGCCAGAC GATTGGCATG ACAAGATAAG GGTCATGGAA ACTGAAATCC ATGATGTTGA AAGCCGCTCC TCTTGGAGGA ACTCTGTTTC TTATCATGCA TGCTACCAGC AAATGCAGAT CCTGAGTCAG GAGGATCATG CCTTTTGCGA GCATCCCAAG GACTTGCAGC AAAACAATTC TAACGACCAA GGTCCCTCGG CGCATTCGCT TCCATCTCCC TGGAGTGGTC TGCCGCTTCC CGAGTTCACA AGCTTAATTC CTGAAGGGAT CACGCGCCAG GAGCTTGGTA TTATTAAGCT CACAGCGCAG TTTGACGCTG TTTATGGGCT CTACTTTCGG GAAGAGATAG AGAAGATGTT GATTGAAGAC CCTCGGTTTG CGTTCCTCAT CAAGCCAACT GATAATAGCA AGTACTACTC TTTCTTCTCT AAGCTCTCTC TTGGAAGGGT GCCTAATCGA AAGATGAGTG GGTCTCCTAG TTTGGAGACC GTTTTTGAGG GCTTTTGGAA TTTGTTTGAA ATGGTTGAGG AGGGAGTGGA CATGGGTATT GTTGATTTGC ATGCTTTTGA GTTTTTTGCC AACACGGAGG ATCAAGAGTT GAATCTACCA CATCAATACC TTTTAATGAT CATGTACCCG CTGGTACCTC CGTTTGCTCA TTTGCAAGCT CGCATACCTC GATGCCATTA TCCACAGCCC CCTCCACGTG AACACCCAAA CACAAAAAGA CTAAAGGTTG ACAAGGACTC TAGCCGGCCC GGTAAAGAGA CTGAAGGTTG A 
Length1341
Protein Sequence
Protein Residue
Map Locationscaffold_6: 387423.. 388886
Download Sequence
A.thaliana
AGI-codeAT5G06520.1
DescriptionSWAP (Suppressor-of-White-APricot)/surp domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.12404 Ahg497400 nitrile specifier protein 2
12.3288 Ahg491590 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
12.8062 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
14.4914 Ahg894843
21.6333 Ahg924251
24.7992 Ahg494525 cytochrome P450, family 706, subfamily A, polypeptide 3
26.4197 Ahg932285 Acyl-CoA N-acyltransferases (NAT) superfamily protein
27.4955 Ahg901770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
30.6594 Ahg944537 Glycosyl hydrolase family 10 protein
33.4963 Ahg343582 xyloglucan endotransglucosylase/hydrolase 21
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression