Detail



ID : Ahg343582

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|343582|fgenesh1_pg.C_scaffold_3003345
Sequence
ATGGTTTCTC ATACACTTTT GGTTATGTCA ATATCTCTCT TTCTTTGTTT AAACATATTG CTTGTTGTAC ACGCTAAAGA TTTAAACCAA GACATTGACA TAACCTGGGG TGATGGTAGA GGAAATATTT TGAGCAATGG TACTCTTCTA AATCTCGTTC TTGATCAATC TTCGGGATCA GGGTTTCAAT CGAAAGCCGA GTATTTGTAC GGAAAATTCG ATATGCAGAT CAAACTTGTC CCGGGAAATT CAGCCGGGAC CGTGACCACC TTCTATTTGA AGTCTCAAGG ATTAACATGG GACGAGATAG ATTTCGAGTT TTTGGGTAAT GTTAGTGGAG ATCCTTACAT TGTTCACACT AATGTTTACA CTCAAGGCAA AGGTGATAGA GAGCAACAAT TCTACCTTTG GTTCGATCCA ACAGCTGAGT TCCACAACTA CTCCATTCTA TGGAATCCGA GTCACATAGT GTTCTATATT GATGGGAAGC CAATTAGAGA ATTCAAGAAT TTGGAAGCAT TGGGTGTGGC TTATCCAAAA AACCAACCCA TGAGAATGTA TGGTAGTCTA TGGAACGCAG ACGATTGGGC CACGAGGGGA GGGCTGGTTA AGACAAACTG GTCACAGGGA CCATTCGTAG CCTCTTTCAT GAACTACAAC TCCGAGAATG CTTGTGTTTG GTCCATCGTT AATGGAACCA CAACTATTTC TCCTTGTAGC CCCGGTGGCT CGTCTTCTTC TTCGAGCAGT AGTAGCGAGT GGTTTTCACA GAGAGGGATG GATTCTTCAA GTAAGAAAGT TCTTAGATGG GTTCAGAAGA AGTTTATGGT TTACAATTAT TGTAAGGACA AGAAGCGATT CTCTAAGGGT TTGCCTGTTG AATGCACTGC TAAGAACAAG GACACAAACT CTTGA 
Length915
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22338864.. 22340214
Download Sequence
A.thaliana
AGI-codeAT2G18800.1
Descriptionxyloglucan endotransglucosylase/hydrolase 21
TAIR curator summary
Alias[ATXTH21][XTH21][XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21][xyloglucan endotransglucosylase/hydrolase 21]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg478795 myb domain protein 26
12 Ahg478708 Plant protein of unknown function (DUF868)
18.4391 Ahg946972 Protein of unknown function (DUF295)
20 Ahg927439
22.8035 Ahg916304
28.5832 Ahg312221 Pectin lyase-like superfamily protein
29.9333 Ahg925144
33.4963 Ahg349490 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
36.7831 Ahg913908 Auxin-responsive GH3 family protein
39.9124 Ahg487217 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression