Detail



ID : Ahg349536

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349536|fgenesh1_pg.C_scaffold_6000129
Sequence
ATGGGAAATG GAGTCACCAC TTTGACCGGT TGCTGTACAG GAACCGTCAC CGGAGAAATT TCCCGGCGAT ACGACTTTTC TCTTGTTCAC GACGGTCTTG GCCACTCTTT CTGCTACATA CGACCGGATC TCACCGGAGT AGTTTTACCG TCTTCGGAGA TTCCTCTTCG TTCAGAAACT ATCCAAGAAA CCACCACAAC TTTCCGTTCA ATCTCCGGTG CATCGGTCAG CGCAAATCCT TCCACCGCGC TCTCCGGAGC TCTATCGTCG GATTCTGACT GTCCGTACAG CTCCGCCGTC TCCGCCTCCG CATTCGAGAG CTCCGGTAAT TTCGCCTCTC TACCACTCCA GCCTGTGCCG CGTGGCTCCA CGTGGCAATC AGGTCCGATT GTTAACGAGT CGGGTCTCGG GTCAGCTCCG TTTGAGCGAC GATTCTTATC GGGTCCGATA GAAAGCGGGT TGTATTCGGG TCCGATCGAA TCAACGAAGA AGGCGGAGAA AGAGAAACCG AAGAAGATCA GAAAAAAATC AAAATCGAAG AAGAATTTTC TCACATTCAA AACACTATTC ACGAGTCTAA TCTCTAACAA CAAGTCTCGC TTGAAGAAGA GTGTGATCGA GCCGATCAAT GGTTCTGATT CATCAGGTTC CGGTCGTCAT CATCATGAAC CTGTGATTAC TTCCTCACGA AGCCACGAGA ACCCTAAATC TGATCTTGAA GAAGAAGATG AAAAACAGAG CATCGACTCT GTTTTGGATG TTCAATGGGC TCAGGGGAAA GCAGGGGAGG ATCGTGTACA CGTGGTTGTG TCTGAAGACA ACGGATGGGT CTTTGTCGGA ATCTATGACG GATTCAGTGG TCCAGATGCG CCGGATTATC TCCTCAACAA TCTTTACACC GCCGTGCAAA AGGAGCTCAA TGGGTTACTT TGGAACGACG AAAAGCTTAG ATCTTTTGGA GAAAACGGCG AGACCAAGAT CGGAAAATGT TCCGATGAGG AAGATTCTGA TTCGGGCAAA GAGAATTGTC CTGTGGTGAA CAGTGATGAT CCAGTTGCTT CCGGTGCAAG AAACCAAGAG AGGAGTGTGA AATGGAGATG TGAATGGGAG AATAAGTCAA ACAACAGGAC CAAATCTGAT AACAAATGTG ATCAGAAAGG ATCAAATTCG ACGACAACAA ACCATAAAGA TGTTCTTAAA GCTCTTTTAC TAGCGCTGAG GAAAACCGAA GACGCGTATC TAGAGCTAGC TGATCAAATG GTTAAAGAGA ATCCAGAATT AGCATTGATG GGTTCTTGTG TTCTCGTGAC ATTGATGAAA GGAGAAGATG TTTACGTGAT GAATGTCGGG GATAGCCGAG CGGTTTTAGG CCGGAAACCT AATTTAGCCA CCGGGAGAAA GAGGCAAAAG GAGTTGGAGA GAATAAGAGA AGATAGTTCA TTAGAAGATA AAGAAATTTT GATGAATGGA GCAATGCGTA ATACTTTGGT TCCTCTACAA CTTAACATGG AACATAGCAC AAGAATTGAA GAGGAAGTGA GAAGAATCAA GAAGGAACAT CCTGACGATG ATTGTGCAGT AGAGAATGAT AGAGTTAAAG GTTATCTTAA GGTCACTCGT GCATTTGGAG CTGGCTTTCT CAAACAGCCT AAATGGAACG ATGCACTTTT AGAGATGTTC AGGATCGATT ATATCGGGAC ATCACCATAC ATTACATGTT CTCCATCACT ATGTCATCAC AAGCTAACGT CACGTGACAA ATTCCTAATC CTATCTTCTG ATGGATTGTA TGAATATTTC TCTAACCAAG AAGCCATTTT CGAGGTTGAA TCTTTCATCT CTGCTTTTCC TGAAGGCGAT CCAGCTCAAC ACTTAATCCA AGAAGTCCTC CTTCGTGCTG CCAACAAATT TGGTATGGAT TTTCATGAAT TGTTGGAGAT ACCACAAGGT GATCGTAGGA GGTATCATGA TGATGTCTCT GTGATAGTGA TCTCACTTGA AGGAAGAATA TGGAGATCAT CAATGTGA 
Length2028
Protein Sequence
Protein Residue
Map Locationscaffold_6: 589272.. 591630
Download Sequence
A.thaliana
AGI-codeAT5G02400.1
Descriptionpol-like 2
TAIR curator summaryEncodes a protein with similarity to the POL locus which is a novel protein phosphatase 2C. Ubiquitously expressed. No phenotype observed in homozygous null mutant background.
Alias[PLL2][pol-like 2]
Gene coexpression
MR
MR Locus Description
22.0454 Ahg323168 Lecithin:cholesterol acyltransferase family protein
58.3609 Ahg487256 cationic amino acid transporter 6
59.1439 Ahg488458 carboxyesterase 17
80.486 Ahg890129 PEBP (phosphatidylethanolamine-binding protein) family protein
85.7321 Ahg495722 expansin A14
87.0172 Ahg908250 Mannose-6-phosphate isomerase, type I
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression