Detail



ID : Ahg351368

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|351368|fgenesh1_pg.C_scaffold_6001961
Sequence
ATGGAGGATG ACAATGGAAA AGTGAAGGGT TCGAGTAAAA AGAGGTTGAG AAAACCTAAA AGTTTGGAAT TTGTTGGATG GGGTTCGAAA AATCTCATTG AGTTTCTTCA GTCACTTGGT AGAGATACCA CCAACAAGAT ATCTGAGAAT GATGTTACAG CGATTATAAT GAGCTATATC CGCGAGAAAA ACCGTGAAAC TCCTTCCAAG AACAAGAAGA GGAGAAAGAC AGTAGCTTGT GATGAGAAGT TGCGTTTGCT TTTCGGGACT CAGAAGATAA ATGTAATCAA AGTCCCTGAT TTGATAGAGA AGCATTATGT AGAGAATCAG GAAGACTCAT ACTTTGATTA TCTATACTCT CCAGAGGATG ATAAACAACA GAGATTGTCT CCATCAGATA AGGTGGCTAA ACAGACGAAA CAGGTTGTGT CAAAGCCTAA AGGTACTTTT GCTGCGATAG TGCGCGATAA TGTCAAGCGC CTGTATTTAA GAAAGAGTTT AGTCCAGGAA CTAGCAAAGT CACCTGAAAC TTTTGAGAGT AAAGTGGTGG GGACTTTTGT GAGGATCAAG AATCCTTGTC AGCTTGTTCA CGTGACAGGT GTGAAGGAGG GAAATCTGAT TGATGGTAAT CTTCTTCAGG TTACAAATTA TTCGTATTAT CTAAAAGATG TTACGACCTC TTCCCTATCA GATGATGATT TCTCTCAGGA GGAATGTGAA GAACTGCATC AAAGAATAAA TAATGGCTTT GCTAAGAGAC TTACAGTTGT GGATATGGAA GAAAAGGCTC GAAGTTTGCA TGAAGATGTG ACAAAACATT GGATTGCAAG AGAACTTGTA GTGTTACAAA GGCTTATTAA TCAGGCCAAT GAAAAGGCTA TCACGCTATC CCAGTATCTG GAAAAAAGGG AGCTTCTTCA GAATCCGGAA GAACAGTTGA GGCTATTGGA TGAAGTACCA GAAATTGTGG CAGAAGAACT TGAACCTGAA TGTGTAGATG ATGATAGAGA AATAGAAAAT GACCTCATTG TACCAAACCC TGAGGCTCAT CAAAGTGACG AAGAACAACG ACGAAGAGAT TCACCAGTTT CTTCTAGTGT CAAGAAAAGT CTAGAAAATT CCAAGCTTCT TAAGAATCCA GAAGAACAGT TGAGGCTGTT GCGTGAAGTT CCTGAAGTTG TTGCAGAAGA ACTTGAACCT GAGTTTGTAG ATAATGATGG GAAAATAGAA AATGACTTCA TCGTACCAAA CCCTGAGGCC TTCACTGAGG CTCATCAAAG TGATGAAGAA AAACAACTAA GTGACTCACC AGATTCTAGT ATCCATAAAA CTCTAGAAAA TTCCGAGCTC CGTGATGGAG AAGACCAGCC AATACAGACT GCTTCTGCAG GTAACAAGGA TCTCCATGAA GATGTGTACG AGCCGCCAAC AAATGGCATC ACACAGAACA AGGACTCTAT CACTAAAGGA GAAATGAATA CCAAAGTCAG TCAGTATCAG TCAAGTACTC CAGTGATTGA TCTCTCTAAC CAACCTCAAG CTCAATCAAA TCCACTAGAG ATTATCGAAT TGAGCGATGA TGACAGTGAT GATGACAAGG ACAAGGATGA TCAAGCTTAC CAGAACTATG ATCCAAAGAA GGTAATGTGG TTCTATGAAT TCCCTAAAGG AAAAACACAT GGACCATTCT CTCTCACAGA TCTCAAAACG TGGAGTGACG AAGAGTACTT TGTTGGAGTT CCAGATTTCA AAGTATGGAA AACAGGAGAG AGTGCAGTGT TACTGACCAA ACTTCTATCT CATATCAAAA CCTAA 
Length1815
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9549700.. 9552704
Download Sequence
A.thaliana
AGI-codeAT5G23480.1
DescriptionSWIB/MDM2 domain;Plus-3;GYF
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
38.4578 Ahg929946 Ribosomal L18p/L5e family protein
39.3446 Ahg314370 AP2/B3-like transcriptional factor family protein
45.5631 Ahg927204 tRNA modification GTPase, putative
60.63 Ahg497207 Subtilase family protein
67.8675 Ahg485480 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)
78.4984 Ahg939221 gamma-tubulin
86.1162 Ahg928725 pumilio 4
93.787 Ahg350872 tRNA (guanine-N-7) methyltransferase
99.6995 Ahg485287 ABL interactor-like protein 2
99.7246 Ahg895965
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression