Detail


ID : Ahg351610

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|351610|fgenesh1_pg.C_scaffold_6002203
Sequence
ATGCAGAGTA GGGTTGTTCA GTTGGAAGAA GGTAAAGATA TTGTAGTTAC GGGCGGCCGG ACCGGGCTAA ATAAGGCGTT TCCTTTCAAG TTACTTCTCT TGCTAGGATT TTTTCTAGCT TTTACTGTTG TTTTATTCTT CATTAGTGTA TCCACATTCA AGTTTTATGG AATCAATAGT GTAGTGACTT CAGTCACGTC TAGTTTTGTG CCTTGCCACG AGAAAAGAAA CGATCTTCAT AAATGGATTG AACCTCCTAT GGTTCTCATG CATAATATGA GCGATGAAGA ACTTCTTTGG CGTGCGTCTT TCATGCCTAA GACGAAAGAG TTTCCGTTTA ATAGGGTGCC GAAAATCGCG TTTATGTTCT TGACAATGGG TCCTTTGCCG CTTGCACCGC TTTGGGAAAG GTTATTAAAG GGTCATGAGA AGCATTATTC AGTTTACATC CATTCACCAG TATCTTCTTC AGCCAAGTTT CAAGCTTCCT CTGTTTTCTA CCGTAGGCAT ATACCAAGTC AGGTTGCAGA ATGGGGAAGA ATGACAATGT GCGATGCAGA GAGGCGGCTT CTTGCCAATG CGCTACTCGA TATCTCAAAC GAATGGTTTG TTCTCCTCTC CGAGTCATGC ATTCCCCTCT TCAACTTCAC AACTATCTAC ACTTACATAA CCAAATCAAA GCACAGCTTT ATGGGTTCAT TTGATGATCC TAGTCCATAT GGCCGAGGCC GCTACCACGG CAACATGGCC CCTGAAGTTT CCATAGACCA ATGGAGAAAA GGGTCTCAAT GGTTTGAGGT TAACCGGGAG CTTGCAGTTT CCATTGTCAA AGATACCTTG TATTACCCTA AATTCAAACA GTTTTGTAAA CCTGCTTGTT ACGTGGACGA GCATTATTTC CCAACAATGT TGACAATTGA GAAACCGGCG GCCTTGGCCA ACCGAAGTGT GACTTGGGTC GACTGGTCGA GAGGTGGTGC CCACCCAGCT ACATTTGGAG CACAAGACAT CAGTGAGGAG TTCTTTGCAT GGGTTCTCAA AGGTGATAAC TGCACTTACA ATGGTGGCTA CACATCCATG TGTTATCTCT TTGCTAGAAA GTTTTCTCCG AGTGCTTTAG AGCCTTTGAT TCAAATTGCT CCCAAGATTC TGAGTTTTTG A
Length1161
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11080841.. 11082146
Download Sequence
A.thaliana
AGI-codeAT5G25970.1
DescriptionCore-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.88819 Virus3796
9.79796 Ahg919808 Tetratricopeptide repeat (TPR)-like superfamily protein
20.4939 Ahg343566
32.5883 Ahg331355 F-box and associated interaction domains-containing protein
48.2908 Ahg937770 glutamine synthetase 1.3
53.1037 Ahg476835 Protein of unknown function (DUF1278)
57.7927 Ahg356826
57.7927 Ahg342976
59.4643 Ahg940863 structural constituent of ribosome;protein binding
63.9218 Ahg900583 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression