Detail



ID : Ahg352166

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352166|fgenesh1_pg.C_scaffold_6002759
Sequence
ATGACGTCGC AGATAAGATT CATTTTCGAG GTGGAGGCGG CTAAGGAAGC CACCGATGGC AATCCCTCGG TTGGTCCTGT GTATCGTAGT ACTTTTGCCA AGGACGGTTT CCCAAATCCG ATTGATGGAA TCCAAAGCTG TTGGGATATT TTCCGCACGG CTGTTGAGAA ATATCCAAAC AATCGAATGC TTGGTAGCCG TGAGATTGTT AACGGGAAGG CAGGAAAGTA CGTGTGGAAA ACATACAAAG AAGTATATGA CATTGTCATA AAACTTGGAA ATTCTCTACG TAGTTGTGGG ATTCAGGAGG GAGAAAAATG TGGTATTTAT GGTATAAACT GTTGTGAGTG GATCATTAGC ATGGAGGCAT GTAATGCACA TGGCCTATAT TGTGTCCCTT TATACGATAC ATTAGGCGCT GGTGCAGTGG AATTCATCAT TTCTCATGCA GAGGTTTCAA TTGCTTTTGT GGAGGAGAAG AAGATCCCTG AGCTTTTTAA GACTTGTCCA AACTCAACAA AATATATGAA GACTGTTGTG AGCTTTGGCG GTGTCAAACC CGAACAAAAA GAAGAAGCTG AAAAATTGGG ATTGGTAATA CATTCTTGGG ATGAGTTTTT GAAGCTGGGT GAGGATAAGC AATATGATCT TCCTATTAAA AAGCAAAGCG ACATATGCAC GATTATGTAT ACTAGTGGAA CCACTGGTGA CCCTAAGGGA GTTTTGATTT CAAATGAAAG CATTGTTACT ATAACTACTG GAGTGATGCA TTTCCTAGGG AATGTGAATG CAAGCCTATC CGAGAAGGAT GTGTATATTT CTTATCTCCC TCTCGCGCAT GTCTTTGATC GGGCTATCGA GGAATGTATT ATTCAAGTAG GTGGTTCAAT TGGTTTCTGG CGCGGGGATG TAAAATTGTT GATTGAAGAC CTTGGTGAGT TAAAACCAAC TATTTTTTGC GCCGTTCCCC GTGTCCTAGA TCGAGTATAC ACAGGACTCC AGCAGAAACT ATCTGTTGGT GGTTTCTTCA AAAAGAAGGT GTTTGATGTT GCTTTTTCCT ATAAATTTGG AAATATGAAG AAGGGACAGT CTCATGTGGC GGCGGCTCCA TTTTGTGACA AACATGTATT CAGCAAGGTT AAACAAGGAC TTGGAGGCAA TGTGAGGATT ATTCTATCTG GAGCGGCTCC TCTTGCTAGT CACATAGAGT CATTTCTAAG AGTTGTGGCA TGTTGTAATG TTCTACAAGG ATATGGTCTA ACTGAGAGCT GTGCTGGAAC TTTTGCAACG TTCCCAGACG AACTAGACAT GCTTGGAACG GTTGGTCCAC CCGTGCCAAA CGTCGATATA CGCCTTGAAT CTGTCCCGGA AATGAATTAC GATGCTCTTG GTAGTACTCC GCGTGGCGAA ATCTGTATCC GTGGGAAAAC TTTGTTTTCA GGGTACTACA AACGTGAAGA CCTCACAAAA GAGGTTCTTA TTGATGGATG GTTGCACACA GGTGATATTG GCGAGTGGCA ACCAAATGGA AGCATGAAGA TAATTGACCG GAAAAAGAAC ATCTTCAAAC TCGCGCAAGG AGAGTACGTC GCTGTTGAGA ATTTAGAAAA TGTCTACAGT CAAGTAGAAG TTATTGAATC AATATGGGTG TATGGAAACA GCTTTGAATC CTTCCTTGTC GCCATCGCTA ACCCGGCCCA ACAAACTCTT GAGCGATGGG CGGTGGAGAA TGGAGTGAAT GGAGACTTCA ACTCCCTCTG CCAAAACGCA AAGGCAAAAG CATTCATACT TGGTGAACTC GTTAAAATAG CCAAAGAGAA AAAGTTGAAG GGTTTTGAGA TCATAAAAGC TATTCATCTG GAACCAGTGG CTTTCGACAT GGAAAGAGAC CTTCTTACTC CAACCTACAA AAAGAAGAGG CCTCAATTGC TCAAATACTA TCAGAATGTG ATAGATGAAA TGTACAAGGC AGCAAAGGAA GGTCAAGCTT CAGGACAGTA G 
Length2001
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19545560.. 19549646
Download Sequence
A.thaliana
AGI-codeAT4G11030.1
DescriptionAMP-dependent synthetase and ligase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.7256 Ahg494865 Pectin lyase-like superfamily protein
25.6125 Ahg488129 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
26.1151 Ahg943128
31.8904 Ahg938233 plastocyanin-like domain-containing protein
37.8814 Ahg479716 Domain of unknown function (DUF26)
38.6005 Ahg480580 Major facilitator superfamily protein
39.4208 Ahg935860 MLP-like protein 328
40.2492 Ahg900378
41.1339 Ahg943016 RNI-like superfamily protein
49.295 Ahg932542 RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression