Detail



ID : Ahg352841

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352841|fgenesh1_pg.C_scaffold_7000014
Sequence
ATGGAAGAAA GCAACAACTC GGCCGTTGTG GATTTCCCTG ACAACTTTAT GGACCAACTC TTGTGGGAGG AGTGCAGCTG GGAAGAAGAG GCAACGCAGA ATGACCAGGC ATTATCATCA GGGTTGAAGG AGAGGGTGGC TTGCGCCATG GGGCACCTGC AAGAGGTGAT GGGAGAGAGG GAGTTGCTGA TCCAGCTGTG GGTGCCTGTT GAGACAAGGA GCGGACGAGT GCTGAGCACG GAGGAGCAGC CTTACTCTAT CAACACCTTC TCCCAGAGCC AGAGCCTGGG CCTCTACAGA GACGCCTCAG CTGGCTACAG CTTCGCAGCA GAGGTTGGGT CGGAGCAGCT GGTGGGGCTG CCTGGGCGTG TGTTCCTGAG GAGGATGCCT GAGTGGACCC CAGACGTTCG GTTTTTCAGG AGGGAGGAGT ACCCTCGCAT AAGATACGCC CGCAGGTACC AGGTTCGAGC CTCCCTCGCT CTCCCACTCT TCCAAGGGAC ATCCGGGAAC TGCGTGGCCG TGATGGAAAT GGTCACCACT CACCGCAACT TGGAGTATGC CTCCCAGCTC CACACCATCT GCCACACCCT TGAGGCCTTT GATCTCCGGA CTTCTCAAGC CTCCATCGTT CCAGCCTCTC TCAAGGTCAC TTCTTCTTCT TCTTCATCAA GAACAGAGGT GGCCTCTATT CTCCAAGGCA TCTGCAGTTC ACACCGACTC CCTCTAGCCG TCACGTGGGC TCACCAAGAC TCCCCATCCT GCCTTTCGGC TCTGATCTCC GCCTCTTACG CCGCTGACCA AGACAGCCGC TGCTTCCTGG CCGCCTGCTC TGAGCACCAT CTACTCGTGG GCGAAGGAAT CGCTGGAAGA GCTTTCGCTA CCAAGAAACA GTGTTTCGCA ACAGATGTGG CCATCTTCAG CAAGTGGAGC TACCCTCTCT CCCACTACGC CAGGATGTTC CATCTCCACG CTGCTCTTGC CGTCCCTATC CTGACCAGAG GCAACCGCAC TGTCCAATTT GTTGTCGAGC TCTTCTTCCC GAGAGACTGT CTTGACATCC AAACTCAGAG CCTGACCCTC GCCTCCCAAC TCAACCTACG CTTCCAGAGC TCACCACATC TGATGGTAGA CGACAACCAA ATTGCACAAC AAGTGAGAGA CGCAGCCACA CCACCCCTGA CACAAGAGGA TCCCAAGGGC AAACAAGTGT CGTTTTCCTT TTCTTCTTCT TCCTCTCTGG AGAACCGAAA ACGCAAGACA AAGGCTGAAA AGGATATCAC TTTGGACACT CTCCGACAAC ACTTTGCTGG CAGCCTTAAG GACGCCGCTA AAAACATTGG TGTATGTCCC ACAACCTTGA AGAGGGTCTG CAGACAACAC GGAATCTCAA GGTGGCCATC GAGGAAGATC AAGAAAGTAG GACATTCTCT TCGGAAACTG CAGGTGGTGA TGGACTCTGT TGAAGGAGTT CAAGGCTCTC TCCATCTCGC CTCCTTCTAC TCAAGCTTCC CTCAACTTCA ATCTTCTTCT TCTTCTTCTT TTCCTTTGAT TAATCCAACC CAAACTGTCC ATGTGCCTCC AAAGTCACCA CCTTCGTCAT CTGGCAGCCA GGGCTCTTCA GGTTCAAGCA CTTGTTGCTC CTCCGAAGAG CAACAACTTG GTGGCTTCGA AAACCCATCT CTCAGTCATC CACAGCTGCT TACTCTAAGC AGCCTGCACG AGGACCAGAG GGCAGTTCGT GTAACCTCAT CCCTACCCCC ATTGCCATCC TCAACAGCTC CAAGGAAAGC AAAAGACGGG ATGAAAGTGA AAGCTATGTT TGGAGATTCG ATGCTGAGGA TGAGCCTGCA GCCCCACTCA CGTCTCACAG ACCTCAGAAG AGAGATCGCA AAGCGGTTTG GGATGGACGA TGTTTTGACA AGTAACTTCA GTCTCAAGTA TCTAGACGAT GATCAAGAAT GGGTTCTCTT GACGTGCGAT GCTGATCTTG AGGAGTGCAT ACAAGTCTAC AAGTCCTCTC TTAAAGAAAC TATCAGAATA TTGGTTCACC GTCCTCTTTC TCTTCCTTCC TTTGGTTCTT AA 
Length2082
Protein Sequence
Protein Residue
Map Locationscaffold_7: 68876.. 71358
Download Sequence
A.thaliana
AGI-codeAT4G38340.1
DescriptionPlant regulator RWP-RK family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
46.1302 Ahg487247 cytochrome P450, family 77, subfamily A, polypeptide 4
57.7668 Ahg351609 Protein of Unknown Function (DUF239)
61.3025 Ahg902762
67.7495 Ahg938484 expansin A16
71.6659 Ahg928861 Pentatricopeptide repeat (PPR) superfamily protein
75.8947 Ahg485725 pleiotropic drug resistance 9
85.3288 Ahg906792
85.8487 Ahg472112 Major facilitator superfamily protein
96.8917 Ahg907708
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression