Detail



ID : Ahg353023

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|353023|fgenesh1_pg.C_scaffold_7000196
Sequence
ATGGAGCAAC CGACGAAAGA GACGACAGTG AAATCGGAAG TTACAACCAA TGATCAGAAT CCGAAGCCAC CGCAAAGTAC TGATCTAAAA CCAGGAGTGG ATCAGGTGGC GACAAAAGGA GCCGAGGATG CGAGTTCTGT GATTGCTTTA TCTGATGAAT CTACGCTACA AGTCGAAATC GAAACAAAAG GCGATCGAGC ACCGACTCGA ACAGCGTCTG GATCGAGGAA ATCGGTCCAT TGGAATCCTG AATTGGTTTC TGAATCTCCG GCACCGGATC AGAAATCCTT ATCGTCGTCT TCCGCCGCGG GATCTAATCC GTACGTCGCT CGTGCTCCTG CTGAAACTTC GGATGCCTCG TTGAAAGAAA CGATGGAAAC TGTGAAAGGT GTGCTTGGGA GATGGGGAAG GAGGGTTGGA GAAGCTGCAA TGAAGGCGGA GAGCCTTGCC GGTAACACGT GGCAACACCT GAAAACTGCT CCGAGTTTTG CGGATGCTGC AATGGGAAGA ATTGCACAGA GTACAAAGGT TCTGGCAGAA GGAGGGTATG AGAAAATTTT CAGGCAAACC TTTGAAACAG TTCCAGAGGA GCAGCTGCAA AATTCATTTG CGTGCTACTT GTCAACATCA GCTGGTCCAG TCATGGGAGT TCTTTACATA TCCACTGCTA AACTTGCCTA CTGTAGCGAT AACCCTCTCT CGTATAAAAA TTCTGGTCAA ACTGAATGGA GCTATTATAA GGTAGTAATT CCATTACATC AGCTTAAATC GGTTAACCCC TCGGCAAGCA TAGTCAATCC TGCAGAAAAG TACATCCAGG TAATCTCGGT CGACGACCAT GAGTTTTGGT TCATGGGTTT CTTAAACTAC GAAGGCGCTG TTACAGCTCT GCAAGATACA TTGCAAGCCG GTGCCTTACA GTCTGTGTGA 
Length930
Protein Sequence
Protein Residue
Map Locationscaffold_7: 865511.. 866964
Download Sequence
A.thaliana
AGI-codeAT2G22475.1
DescriptionGRAM domain family protein
TAIR curator summaryEncodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.
Alias[GEM][GL2-EXPRESSION MODULATOR]
Gene coexpression
MR
MR Locus Description
32.4037 Ahg331037
47.7912 Ahg482498 poltergeist like 1
57.4195 Ahg487229 UDP-Glycosyltransferase superfamily protein
65.9242 Ahg474258 ABC-2 type transporter family protein
77.0779 Ahg921128
82.1401 Ahg920337 AAA-type ATPase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression