Detail



ID : Ahg354651

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|354651|fgenesh1_pg.C_scaffold_7001824
Sequence
ATGGGTGGAG GAAGCAGATT TCAAGAACCA GTGAGGATGA GCCGTAGGAA ACAAGTAACA AAAGAGAAGG AAGAAGATGA AAACTTCAAA TCTCCAAATC TTGAAGCAGA GAGACGTAGA AGAGAGAAGC TTCATGGTCG GCTTATGGCT CTGCGATCTC ATGTCCCAAT TGTCACCAAC ATGACTAAAG CAAGTATTGT TGAAGATGCG ATTACTTACA TAGGAGAGCT TCAGAATAAT GTTAAGAATC TCTTAGAGAC ATTTCATGAA ATGGAAGAAG CTCCTCCTGA GACTGATGAA GAACAAACAG ATCAAATGAT TAAACCTGAA GTTGAAACTA GTGATCTTAA AGAAGAGATA AAGAAACTCG GAATCGAGGA GAATGTGCAA TTGTGTAAGA TTGGGGAGAG CAAGTTTTGG TTAAAGATCA TAACAGAGAA GAAAGCTGGG ATCTTTACAA AATTCATGGA GGTTATGAGA TTTCTCGGAT TCGAGATTAT CGACATTAGT CTAACAACTT CAAATGGAGC CATTCTTATT TGTTCCTCTG TTCAGATACA TCAGGAACTC TGTGATGTTG AACAGACAAA AGATTTTCTT TTGGAAGTTA TGAGAAGCAA TCCGTAA 
Length627
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8753069.. 8753850
Download Sequence
A.thaliana
AGI-codeAT4G21330.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summaryEncodes a bHLH transcription factor strongly expressed in the tapetum from late anther stage 5 to early stage 6, and at a lower level in meiocytes. dyt1 mutant exhibits abnormal anther morphology beginning at anther stage 4. DYT1 acts downstream of SPL/NZZ and EMS1/EXS , and is required for normal expression of AMS, MS1 and other tapetum preferential genes.
Alias[DYT1][DYSFUNCTIONAL TAPETUM 1]
Gene coexpression
MR
MR Locus Description
4.12311 Ahg898863
4.79583 Ahg930977 histidine kinase 5
8.7178 Virus1926
10.6771 Ahg357347
12 Ahg928422
12.8452 Ahg922027 cyclase associated protein 1
12.8452 Ahg321026 Domain of unknown function (DUF313)
13.4164 Ahg930898
14.8324 Ahg492222 vacuolar ATP synthase G3
14.9666 Ahg920933
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression